Information on SUBCLASS 4.29.1 |
Subclass Accession number: 9078
Subclass: 4.29.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 35.6 +/- 19.5 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | pcYcXDXp |
(φψ)-conformation: | aaplapaa |
Pattern: | [ILV] | [T] | x | [AE] | [MT] | [AG] | [LV] | [WY] | [FT] | [AL] | [DKN] | [KL] | [FI] | [TV] | [EQS] | [DN] | [Y] | [GN] | x | [D] | [PS] | [RS] | [FI] | [T] | [ANS] | [IL] | [LV] | [DN] | [ANS] |
Conservation: | -0.126 | 1.391 | -0.923 | -0.723 | -0.498 | -0.290 | -0.161 | 2.016 | -0.627 | -0.833 | -0.631 | -0.923 | 0.097 | -0.175 | -0.559 | 0.467 | 2.691 | 0.152 | -1.281 | 2.041 | -0.158 | -0.723 | -0.290 | 1.391 | -0.848 | 0.111 | -0.204 | 0.467 | -0.848 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dtd_A_428 | 1dtd | A | 429 | 457 | VTQATALWTANKIVSDYGKDPSITSILDA | HHHHHHHHHHHHHHHHTTTSHHHHHHHHH | aaaaaaaaaaaaaaaaxvaxaaaaaaaaa |
1m4l_A_73 | 1m4l | A | 74 | 102 | ITQATGVWFAKKFTEDYGQDPSFTAILDS | HHHHHHHHHHHHHHHHTTTSHHHHHHHHH | aaaaaaaaaaaaaaaaxvaxaaaaaaaaa |
1obr_*_74 | 1obr | - | 74 | 102 | LTVEMALYTLDLFTQNYNLDSRITNLVNN | HHHHHHHHHHHHHHTTBTTBHHHHHHHHH | aaaaaaaaaaaaaaaapvaxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1obr_*_74 | 1obr | * | CACALCIUM ION | V - 100 |
1obr_*_74 | 1obr | * | CACALCIUM ION | N - 101 |
1obr_*_74 | 1obr | * | CACALCIUM ION | N - 102 |
Clusters included in this Subclass |
CLUSTER: HH.5.63 |