Information on SUBCLASS 4.30.1 |
Subclass Accession number: 9079
Subclass: 4.30.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 19.6 +/- 16.3 Average RMSD (Å) : 0.800 +/- 0.361 Consensus geometry
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Consensus Sequence: | XXGXhpXX |
(φψ)-conformation: | aalabbaa |
Pattern: | [AGV] | x | [DEG] | x | x | [AIL] | x | x | [G] | [LT] | [AL] | [DT] | [EF] | x | [EKL] | [KL] | x |
Conservation: | -0.476 | -0.814 | 0.115 | -0.240 | -0.560 | -0.138 | -0.814 | -0.814 | 3.410 | 0.458 | 0.144 | 0.870 | -0.046 | 0.183 | -0.645 | -0.074 | -0.560 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a0d_A_390 | 1a0d | A | 390 | 406 | GIGREIVEGTADFHKLE | HHHHHHHHT---HHHHH | eaaaaaaavabbaaaaa |
1gpj_A_100 | 1gpj | A | 109 | 125 | AYDRAARLGTLDEALKI | HHHHHHHHT---HHHHH | aaaaaaaavaxbaaaaa |
1jsw_A_438 | 1jsw | A | 438 | 454 | VREVVLERGLLTEAELD | HHHHHHHHTSS-SHHHH | aaaaaaaavabxaaaNa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gpj_A_100 | 1gpj | A | CITCITRIC ACID | Q - 100 |
1gpj_A_100 | 1gpj | A | GMC(2R,3R,4S,5S)-4-AMINO-2-[6-(DIMETHYLAMINO)-9H-PURIN-9-YL]-5-(HYDROXYMETHYL)TETRAHYDRO-3-FURANOL | E - 101 |
1gpj_A_100 | 1gpj | A | GLUGLUTAMIC ACID | E - 101 |
1gpj_A_100 | 1gpj | A | CITCITRIC ACID | E - 101 |
1gpj_A_100 | 1gpj | A | GLUGLUTAMIC ACID | I - 102 |
1gpj_A_100 | 1gpj | A | CITCITRIC ACID | R - 104 |
1gpj_A_100 | 1gpj | A | GMC(2R,3R,4S,5S)-4-AMINO-2-[6-(DIMETHYLAMINO)-9H-PURIN-9-YL]-5-(HYDROXYMETHYL)TETRAHYDRO-3-FURANOL | Q - 105 |
1gpj_A_100 | 1gpj | A | GLUGLUTAMIC ACID | Q - 105 |
1jsw_A_438 | 1jsw | A | ACTACETATE ION | R - 445 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gpj_A_100 | 1gpj | A | ACTRECOGNITION AND ACTIVE SITE, HERE OCCUPIED BY THE INHIBITOR GLUTAMYCIN | E - 101 |
1gpj_A_100 | 1gpj | A | AC2GLU BINDING SITE FOR CHAIN A | I - 102 |
1gpj_A_100 | 1gpj | A | ACTRECOGNITION AND ACTIVE SITE, HERE OCCUPIED BY THE INHIBITOR GLUTAMYCIN | Q - 105 |
Clusters included in this Subclass |
CLUSTER: HH.5.188 |