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Information on SUBCLASS 4.30.1
Subclass Accession number: 9079
Subclass: 4.30.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 19.6 +/- 16.3
Average RMSD (Å) : 0.800 +/- 0.361

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXGXhpXX
(φψ)-conformation: aalabbaa
Pattern: [AGV]x[DEG]xx[AIL]xx[G][LT][AL][DT][EF]x[EKL][KL]x
Conservation:-0.476-0.8140.115-0.240-0.560-0.138-0.814-0.8143.4100.4580.1440.870-0.0460.183-0.645-0.074-0.560
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0d_A_3901a0d   A390406GIGREIVEGTADFHKLEHHHHHHHHT---HHHHHeaaaaaaavabbaaaaa
1gpj_A_1001gpj   A109125AYDRAARLGTLDEALKIHHHHHHHHT---HHHHHaaaaaaaavaxbaaaaa
1jsw_A_4381jsw   A438454VREVVLERGLLTEAELDHHHHHHHHTSS-SHHHHaaaaaaaavabxaaaNa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpj_A_1001gpj   A     CITCITRIC ACID Q - 100
1gpj_A_1001gpj   A     GMC(2R,3R,4S,5S)-4-AMINO-2-[6-(DIMETHYLAMINO)-9H-PURIN-9-YL]-5-(HYDROXYMETHYL)TETRAHYDRO-3-FURANOL E - 101
1gpj_A_1001gpj   A     GLUGLUTAMIC ACID E - 101
1gpj_A_1001gpj   A     CITCITRIC ACID E - 101
1gpj_A_1001gpj   A     GLUGLUTAMIC ACID I - 102
1gpj_A_1001gpj   A     CITCITRIC ACID R - 104
1gpj_A_1001gpj   A     GMC(2R,3R,4S,5S)-4-AMINO-2-[6-(DIMETHYLAMINO)-9H-PURIN-9-YL]-5-(HYDROXYMETHYL)TETRAHYDRO-3-FURANOL Q - 105
1gpj_A_1001gpj   A     GLUGLUTAMIC ACID Q - 105
1jsw_A_4381jsw   A     ACTACETATE ION R - 445
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gpj_A_1001gpj   A ACTRECOGNITION AND ACTIVE SITE, HERE OCCUPIED BY THE INHIBITOR GLUTAMYCINE - 101
1gpj_A_1001gpj   A AC2GLU BINDING SITE FOR CHAIN AI - 102
1gpj_A_1001gpj   A ACTRECOGNITION AND ACTIVE SITE, HERE OCCUPIED BY THE INHIBITOR GLUTAMYCINQ - 105

Clusters included in this Subclass
CLUSTER: HH.5.188