ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.32.1

Subclass Accession number: 9081
Subclass: 4.32.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 37.5 +/- 17.5
Average RMSD (Å) : 0.367 +/- 0.058

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 135-180

rho (°): 135-180

Consensus Sequence:	pXXXFXEX
(φψ)-conformation:	aagbbpaa

Pattern:	[LMV]	[FY]	x	[EH]	[L]	[QRS]	[KR]	x	[GRS]	x	[F]	[ADT]	[E]	[EPQ]	[HR]	[AT]	[AR]	[FT]	[Y]	[AGI]	[AT]	[EQ]	[IL]	[AV]	x	[AT]	[FL]	[ES]	[Y]	[CL]	[H]	[S]
Conservation:	-0.292	0.906	-1.296	0.364	0.546	-0.682	0.320	-1.185	-0.961	-1.017	1.550	-0.961	1.048	-0.515	0.083	-0.341	-0.491	-0.474	2.053	-1.240	-0.341	0.344	0.060	-0.425	-1.129	-0.324	-0.254	-0.248	2.053	-0.250	2.555	0.546

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1apm_E_128	1apm	E	128	159	MFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS	HHHHHHHH----HHHHHHHHHHHHHHHHHHHH	aaaaaaaagbxxaaaaaaaaaaaaaaaaaaaa
1gzk_A_237	1gzk	A	237	268	LFFHLSRERVFTEERARFYGAEIVSALEYLHS	HHHHHHTTSS--HHHHHHHHHHHHHHHHHHHH	aaaaaaaNgbbpaaaaaaaaaaaaaaaaaaaa
1mq4_A_218	1mq4	A	218	249	VYRELQKLSKFDEQRTATYITELANALSYCHS	HHHHHHHHSS--HHHHHHHHHHHHHHHHHHHH	aaaaaaaagbbxaaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass