Information on SUBCLASS 5.4.3 |
Subclass Accession number: 9104
Subclass: 5.4.3 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.7 +/- 10.2 Average RMSD (Å) : 0.767 +/- 0.153 Consensus geometry
|
Consensus Sequence: | XhXhphXXp |
(φψ)-conformation: | aalbbppaa |
Pattern: | [AQR] | x | x | x | x | [AL] | [ALM] | [EGR] | [FKR] | [ARS] | [FGM] | [GR] | [FLV] | [ERT] | [LPV] | x | x | [DRS] | x | [FL] |
Conservation: | 0.381 | -1.356 | -1.008 | -0.661 | -1.356 | 1.076 | 0.555 | -0.313 | -0.313 | 0.208 | -0.835 | 1.832 | 0.729 | 0.208 | -0.487 | -1.182 | 1.054 | -0.140 | -0.487 | 2.095 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1di1_A_204 | 1di1 | A | 207 | 226 | ALLSALMRFSMGLRLSADEL | HHHHHHHHHHHT----HHHH | aaaaaaaaaaavxbbxaaaa |
1ojr_A_253 | 1ojr | A | 253 | 272 | REELIALGKRFGVTPLASAL | HHHHHHHHHHHT----HHHH | aaaaaaaaaaavbbxpaaaa |
1ps1_A_179 | 1ps1 | A | 180 | 199 | QPTVDLAERAGRFEVPHRVF | HHHHHHHHHHHT----HHHH | aaaaaaaaaaavbbppaaaa |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ojr_A_253 | 1ojr | A | GO1GOL BINDING SITE FOR CHAIN A | F - 263 |
Clusters included in this Subclass |
CLUSTER: HH.4.187 |