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Information on SUBCLASS 5.5.1
Subclass Accession number: 9105
Subclass: 5.5.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 12.1 +/- 13.7
Average RMSD (Å) : 0.888 +/- 0.242

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hXcXpXXhX
(φψ)-conformation: aapaappaa
Pattern: [almv][ADRST]x[filmtv][adgnrs][DKNT][dkps][DENQST][ailt][ADGNPST]xx[DEK][fikl]xx[agly][AFLMTV]x[AEKNRT][AFILTV]
Conservation:0.2880.738-0.925-0.122-0.9802.0500.0100.8690.248-0.088-0.854-1.1192.592-0.071-0.670-1.160-0.9090.373-0.8950.1460.478
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bd3_A_431bd3   A4969MTIIRDKETPKEEFVFYADRLHHHHH-TT--HHHHHHHHHHHaaaaapaapxaaaaaaaaaaa
1brm_A_1871brm   A187207ADELATPSSAILDIERKVTTLHHHHH-TT--HHHHHHHHHHHaaaaaxaabxaaaaaaaaaaa
1ezf_A_641ezf   A80100DTLEDDMTISVEKKVPLLHNFHHHHH-TTS-HHHHHHHHHHHaaaaaxaaxxaaaaaaaaaaa
1gnl_A_1681gnl   A178198LAKTLDDSLSVADLVALTLETHHHTT-TT--HHHHHHHHHHHaaaaaxaaxxaaaaaaaaaaa
1h0o_A_2021h0o   A212232LRWIGDKEATYGERVVAFAAVHHHHH-SSS-HHHHHHHHHHHaaaaaxaapxaaaaaaaaaaa
1klx_A_291klx   A3151LSLVSNSQINKQKLFQYLSKAHHHHT-TTS-HHHHHHHHHHHaaaaaxaabxaaaaaaaaaaa
1o5o_A_101o5o   A1636LTIMRDKNTGPKEFRELLREIHHHHHSTT--HHHHHHHHHHHaaaaapaaxxaaaaaaaaaaa
2occ_E_82occ   E1636VTYFNKPDIDAWELRKGMNTLHHHHH-TT--HHHHHHHHHHHaaaaaxaaxxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bd3_A_431bd3   A     PO4PHOSPHATE ION K - 59
1bd3_A_431bd3   A     PO4PHOSPHATE ION E - 60
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID V - 69
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 72
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Y - 73
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 76
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID R - 77
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID D - 80
1h0o_A_2021h0o   A     COCOBALT (II) ION E - 233
1h0o_A_2021h0o   A     COCOBALT (II) ION F - 237
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0o_A_2021h0o   A CO1CO BINDING SITE FOR CHAIN AE - 233

Clusters included in this Subclass
CLUSTER: HH.4.77
CLUSTER: HH.5.92
CLUSTER: HH.6.112