Information on SUBCLASS 5.19.1 |
Subclass Accession number: 9123
Subclass: 5.19.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 14.8 +/- 16.6 Average RMSD (Å) : 0.567 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXcXPXcpX |
(φψ)-conformation: | aalbppgaa |
Pattern: | [GKQ] | [FLV] | [AS] | [DER] | x | [AEL] | [GN] | [IKL] | [P] | x | [GK] | [EY] | [AGK] | [KQT] | [AKR] | [EQY] | [FMV] | [ADG] |
Conservation: | -0.523 | -0.217 | 0.511 | -0.064 | -0.676 | -1.059 | 0.933 | -0.753 | 3.532 | -0.165 | 0.288 | 0.107 | -0.600 | -0.294 | -0.217 | -0.141 | -0.141 | -0.523 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1geg_A_188 | 1geg | A | 196 | 213 | QVSEAAGKPLGYGTAEFA | HHHHHHT--TTHHHHHHH | aaaaaavbppgaaaaaaa |
1k2w_A_190 | 1k2w | A | 196 | 213 | KFADYENLPRGEKKRQVG | HHHHHHT--TTHHHHHHH | aaaaaalbxpgaaaaaaa |
2kfn_A_772 | 2kfn | A | 772 | 789 | GLARQLNIPRKEAQKYMD | HHHHHHT--TTTHHHHHH | aaaaaavxwxvaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1geg_A_188 | 1geg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | P - 188 |
1geg_A_188 | 1geg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | M - 189 |
1geg_A_188 | 1geg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | W - 190 |
2kfn_A_772 | 2kfn | A | MGMAGNESIUM ION | Y - 791 |
Clusters included in this Subclass |
CLUSTER: HH.5.134 |