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Information on SUBCLASS 6.3.1
Subclass Accession number: 9132
Subclass: 6.3.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 38.7 +/- 27.0
Average RMSD (Å) : 0.650 +/- 0.151

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXchhGcpXp
(φψ)-conformation: aalaaeabaa
Pattern: [ST]x[ACST][I][AIL][HNR][HY][ILM][AG][DKRST][EKST][FHLY][dgn][LM][filmy][G][GKT][CDNT]x[ekqr][E][akr][ay]x[IMV][DES][EKM][ILVY]x[DEG][AGQT][AILTV][ael][D][IL][egrt][cehnqy][gklm][ILVY][agilvy]
Conservation:0.621-0.716-0.0621.354-0.1620.3971.8220.5100.491-0.652-0.1040.014-0.1200.870-0.7462.566-0.422-0.486-1.164-0.3031.960-0.497-0.445-0.9860.6580.569-0.079-0.118-1.058-0.111-0.557-0.371-0.9802.5660.808-1.361-1.177-1.328-0.099-1.104
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqw_A_651aqw   A65104SNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYIHHHHHHHHHHHHT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaavaaeabaaaaaaaaaaaaaaaaaaaaaa
1dug_A_671dug   A67106SMAIIRYIADKHNMLGGCPKERAEISMLEGAVLDIRYGVSHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalaaeabaaaaaaaaaaaaaaaaaaaaaa
1f3a_A_671f3a   A67106TRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalaaeabaaaaaaaaaaaaaaaaaaaaaa
1glq_A_651glq   A65104SNAILRHLGRSLGLYGKNQREAAQMDMVNDGVEDLRGKYVHHHHHHHHHHHHT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaavaaeabaaaaaaaaaaaaaaaaaaaaaa
1gum_A_681gum   A68107TRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalaaeabaaaaaaaaaaaaaaaaaaaaaa
1k3y_A_681k3y   A68107TRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalaaeabaaaaaaaaaaaaaaaaaaaaaa
1oe8_A_711oe8   A71110SLAIARYMAKKHHMMGGTEEEYYNVEKLIGQAEDLEHEYYHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalaaeabaaaaaaaaaaaaaaaaaaaaaa
2fhe_A_672fhe   A67106SLAILRYIADKHGMIGTTSEERARVSMIEGAAVDLRQGISHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaavaaeabaaaaaaaaaaaaaaaaaaaaaa
2gsq_*_632gsq   -63102SMCIARHLAREFGLDGKTSLEKYRVDEITETLQDIFNDVVHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaavaaeaxaaaaaaaaaaaaaaaaaaaaaa
2gsr_A_632gsr   A63102SNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYAHHHHHHHHHHHHT-S-SSHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaavaaeabaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqw_A_651aqw   A     ILGGLUTAMYL GROUP S - 65
1aqw_A_651aqw   A     ILGGLUTAMYL GROUP N - 66
1aqw_A_651aqw   A     ILGGLUTAMYL GROUP D - 94
1aqw_A_651aqw   A     ILGGLUTAMYL GROUP E - 97
1aqw_A_651aqw   A     ILGGLUTAMYL GROUP D - 98
1dug_A_671dug   A     GSHGLUTHATHIONE S - 67
1dug_A_671dug   A     GSHGLUTHATHIONE M - 68
1dug_A_671dug   A     GSHGLUTHATHIONE G - 96
1dug_A_671dug   A     GSHGLUTHATHIONE A - 97
1dug_A_671dug   A     GSHGLUTHATHIONE D - 100
1dug_A_671dug   A     GSHGLUTHATHIONE Y - 103
1f3a_A_671f3a   A     GSHGLUTHATHIONE T - 67
1f3a_A_671f3a   A     GSHGLUTHATHIONE R - 68
1f3a_A_671f3a   A     GSHGLUTHATHIONE E - 96
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE S - 65
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE N - 66
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE D - 94
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE E - 97
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE D - 98
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE V - 104
1glq_A_651glq   A     GTBS-(P-NITROBENZYL)GLUTATHIONE Y - 108
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE T - 68
1k3y_A_681k3y   A     GOLGLYCEROL T - 68
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE R - 69
1k3y_A_681k3y   A     GOLGLYCEROL R - 69
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE I - 71
1k3y_A_681k3y   A     GOLGLYCEROL L - 72
1k3y_A_681k3y   A     GOLGLYCEROL I - 96
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE E - 97
1k3y_A_681k3y   A     GOLGLYCEROL E - 97
1k3y_A_681k3y   A     GOLGLYCEROL I - 99
1k3y_A_681k3y   A     GOLGLYCEROL A - 100
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE D - 101
1k3y_A_681k3y   A     GOLGLYCEROL D - 101
1k3y_A_681k3y   A     GOLGLYCEROL E - 104
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE L - 107
1k3y_A_681k3y   A     GTXS-HEXYLGLUTATHIONE L - 108
1oe8_A_711oe8   A     GSHGLUTHATHIONE S - 71
1oe8_A_711oe8   A     GSHGLUTHATHIONE L - 72
1oe8_A_711oe8   A     GSHGLUTHATHIONE G - 100
1oe8_A_711oe8   A     GSHGLUTHATHIONE Q - 101
1oe8_A_711oe8   A     GSHGLUTHATHIONE D - 104
2fhe_A_672fhe   A     GGLGAMMA-GLUTAMIC ACID S - 67
2fhe_A_672fhe   A     GGLGAMMA-GLUTAMIC ACID L - 68
2fhe_A_672fhe   A     GGLGAMMA-GLUTAMIC ACID G - 96
2fhe_A_672fhe   A     GGLGAMMA-GLUTAMIC ACID A - 97
2fhe_A_672fhe   A     GGLGAMMA-GLUTAMIC ACID D - 100
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE S - 63
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE M - 64
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE I - 66
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE F - 98
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE N - 99
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE V - 102
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE K - 103
2gsq_*_632gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE I - 104
2gsr_A_632gsr   A     ILGGLUTAMYL GROUP S - 63
2gsr_A_632gsr   A     ILGGLUTAMYL GROUP N - 64
2gsr_A_632gsr   A     ILGGLUTAMYL GROUP D - 92
2gsr_A_632gsr   A     ILGGLUTAMYL GROUP E - 95
2gsr_A_632gsr   A     ILGGLUTAMYL GROUP D - 96
2gsr_A_632gsr   A     OCSCYSTEINESULFONIC ACID Y - 106
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gum_A_681gum   A GTAGLUTATHIONE BINDING SITE.D - 101
1gum_A_681gum   A HTAELECTROPHILIC SUBSTRATE BINDING SITE.E - 104
1gum_A_681gum   A HTAELECTROPHILIC SUBSTRATE BINDING SITE.I - 107
1gum_A_681gum   A HTAELECTROPHILIC SUBSTRATE BINDING SITE.M - 108
1oe8_A_711oe8   A AC1GSH BINDING SITE FOR CHAIN AS - 71
1oe8_A_711oe8   A AC2GSH BINDING SITE FOR CHAIN BD - 104

Clusters included in this Subclass
CLUSTER: HH.6.15
CLUSTER: HH.8.15