Information on SUBCLASS 6.5.1 |
Subclass Accession number: 9134
Subclass: 6.5.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 10.0 +/- 12.1 Average RMSD (Å) : 1.120 +/- 0.356 Consensus geometry
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Consensus Sequence: | XXpXXXhpXX |
(φψ)-conformation: | aapappbpaa |
Pattern: | x | [EL] | x | [EKL] | [AEQR] | [ACDGN] | [AGKQR] | x | x | [EKSY] | [AEPT] | x | [EKQT] | [FLTV] | x | [EKRS] | x | x | [hkr] | x | [cek] |
Conservation: | -1.268 | 2.333 | -1.235 | -0.036 | 1.023 | -0.784 | -0.179 | -1.328 | 0.848 | 0.316 | 0.202 | -0.614 | 1.303 | 0.391 | 0.290 | 1.264 | -0.844 | -1.055 | 0.699 | -0.602 | -0.722 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iru_J_57 | 1iru | J | 74 | 94 | YELKEGRQIKPYTLMSMVANL | HHHHSSS---HHHHHHHHHHH | aaaaxabbpxaaaaaaaaaaa |
1k4m_A_75 | 1k4m | A | 75 | 95 | RELKRNAPSYTAQTLKEWRQE | HHHH-SS---HHHHHHHHHHH | aaaapaxxbbaaaaaaaaaaa |
1nup_A_83 | 1nup | A | 83 | 103 | WESEQAQWMETVKVLRHHHSK | HHHHSSS---HHHHHHHHHHH | aaaaxabpbpaaaaaaaaaaa |
1o08_A_1049 | 1o08 | A | 1056 | 1076 | ILDLADKKVSAEEFKELAKRK | HHTTSSS---HHHHHHHHHHH | aaaabaxxxxaaaaaaaaaaa |
1q44_A_235 | 1q44 | A | 243 | 263 | AEFLECGFIEEEEVREIVKLC | HHHH-SS---HHHHHHHHHHH | aaaabaxxbxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.7.20 |