Information on SUBCLASS 6.26.1 |
Subclass Accession number: 9155
Subclass: 6.26.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 31.7 +/- 16.3 Average RMSD (Å) : 0.633 +/- 0.058 Consensus geometry
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Consensus Sequence: | pXCPpXLXhp |
(φψ)-conformation: | aapaalppaa |
Pattern: | [ANP] | [C] | x | [DKS] | [SV] | [C] | [P] | [KT] | x | [L] | [DNP] | [ILP] | [KQT] | [RS] | [AFK] | [I] | [AGT] | [HSY] | [IL] | [KRS] |
Conservation: | -0.762 | 2.385 | -0.762 | -0.507 | -0.603 | 2.385 | 1.619 | -0.221 | -0.294 | 0.471 | -0.422 | -0.762 | -0.507 | -0.366 | -0.932 | 0.471 | -0.592 | -0.337 | 0.116 | -0.379 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gte_A_86 | 1gte | A | 86 | 105 | PCQKSCPTHLDIKSFITSIS | HHHHTSTT---HHHHHHHHH | aaaaaxaalpxaaaaaaaaa |
1nek_B_211 | 1nek | B | 211 | 230 | NCVSVCPKGLNPTRAIGHIK | HHHHH-TT---HHHHHHHHH | aaaaapaavxbaaaaaaaaa |
1qla_B_213 | 1qla | B | 213 | 232 | ACHDVCPKNLPLQSKIAYLR | HHHHH-TT---HHHHHHHHH | aaaaapaalxxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gte_A_86 | 1gte | A | FA2FS4 BINDING SITE FOR CHAIN A | P - 86 |
1gte_A_86 | 1gte | A | FA1FS4 BINDING SITE FOR CHAIN A | C - 91 |
1gte_A_86 | 1gte | A | FA1FS4 BINDING SITE FOR CHAIN A | P - 92 |
1gte_A_86 | 1gte | A | FA1FS4 BINDING SITE FOR CHAIN A | I - 97 |
1qla_B_213 | 1qla | B | FS5FE3S4 IRON SULPHUR CENTRE LIGANDS FOR CHAIN B | C - 214 |
1qla_B_213 | 1qla | B | FS1FE4S4 IRON SULPHUR CENTRE LIGANDS FOR CHAIN B | C - 218 |
Clusters included in this Subclass |
CLUSTER: HH.6.118 |