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Information on SUBCLASS 7.9.1
Subclass Accession number: 9167
Subclass: 7.9.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 65.5 +/- -16.2
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hRGDAFXhpPh
(φψ)-conformation: aalpabaNbaa
Pattern: x[G][EG][Y][A][G][I][ASV][Q][A][AP][H][AS][AG][R][G][D][A][F][CTV][FV][HN][P][LV][ILV][K][IV][AC]
Conservation:-1.3661.009-1.1871.526-0.0251.009-0.025-1.5200.492-0.025-1.0112.044-0.785-0.8490.4921.0091.009-0.0251.009-1.290-1.103-0.0681.526-0.782-0.7150.492-0.278-0.563
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6v_A_4881e6v   A488515LGEYAGIVQAAHAARGDAFCVHPVIKVAHHHHHHHHHHHHHHHT-S-SS-HHHHHHaaaaaaaaaaaaaaavxabaNbaaaaaa
1e6y_A_15051e6y   A15051532QGGYAGIAQAAHSGRGDAFTVNPLLKVCHHHHHHHHHHHHHTTT-S-SS-HHHHHHaaaaaaaaaaaaaaavxabaNbaaaaaa
1hbn_A_4851hbn   A485512QGEYAGISQAPHAARGDAFVFNPLVKIAHHHHHHHHHHHHHHHT-S-SS-HHHHHHaaaaaaaaaaaaaaavxabaNbaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6y_A_15051e6y   A     GOLGLYCEROL R - 1519
1hbn_A_4851hbn   A     MGN2-METHYL-GLUTAMINE E - 487
1hbn_A_4851hbn   A     MGMAGNESIUM ION E - 487

Clusters included in this Subclass
CLUSTER: HH.8.48