Information on SUBCLASS 7.9.1 |
Subclass Accession number: 9167
Subclass: 7.9.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 65.5 +/- -16.2 Average RMSD (Å) : 0.167 +/- 0.058 Consensus geometry
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Consensus Sequence: | hRGDAFXhpPh |
(φψ)-conformation: | aalpabaNbaa |
Pattern: | x | [G] | [EG] | [Y] | [A] | [G] | [I] | [ASV] | [Q] | [A] | [AP] | [H] | [AS] | [AG] | [R] | [G] | [D] | [A] | [F] | [CTV] | [FV] | [HN] | [P] | [LV] | [ILV] | [K] | [IV] | [AC] |
Conservation: | -1.366 | 1.009 | -1.187 | 1.526 | -0.025 | 1.009 | -0.025 | -1.520 | 0.492 | -0.025 | -1.011 | 2.044 | -0.785 | -0.849 | 0.492 | 1.009 | 1.009 | -0.025 | 1.009 | -1.290 | -1.103 | -0.068 | 1.526 | -0.782 | -0.715 | 0.492 | -0.278 | -0.563 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e6v_A_488 | 1e6v | A | 488 | 515 | LGEYAGIVQAAHAARGDAFCVHPVIKVA | HHHHHHHHHHHHHHHT-S-SS-HHHHHH | aaaaaaaaaaaaaaavxabaNbaaaaaa |
1e6y_A_1505 | 1e6y | A | 1505 | 1532 | QGGYAGIAQAAHSGRGDAFTVNPLLKVC | HHHHHHHHHHHHHTTT-S-SS-HHHHHH | aaaaaaaaaaaaaaavxabaNbaaaaaa |
1hbn_A_485 | 1hbn | A | 485 | 512 | QGEYAGISQAPHAARGDAFVFNPLVKIA | HHHHHHHHHHHHHHHT-S-SS-HHHHHH | aaaaaaaaaaaaaaavxabaNbaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e6y_A_1505 | 1e6y | A | GOLGLYCEROL | R - 1519 |
1hbn_A_485 | 1hbn | A | MGN2-METHYL-GLUTAMINE | E - 487 |
1hbn_A_485 | 1hbn | A | MGMAGNESIUM ION | E - 487 |
Clusters included in this Subclass |
CLUSTER: HH.8.48 |