ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.14.1

Subclass Accession number: 9172
Subclass: 7.14.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 70.2 +/- -23.4
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 7

delta (°): 45-90

theta (°): 0-45

rho (°): 90-135

Consensus Sequence:	MXGpVXYGSWY
(φψ)-conformation:	aalabplepaa

Pattern:	[FW]	[DPS]	[ES]	[F]	[LV]	[E]	[K]	[F]	[M]	[AQ]	[G]	[EQ]	[V]	[PS]	[Y]	[G]	[S]	[W]	[Y]	[DKQ]	[H]	[V]	[KQ]	[AES]	[W]	[W]	[E]	[KL]
Conservation:	-0.092	-1.212	-0.918	0.389	-0.840	0.038	0.038	0.389	0.038	-1.093	0.389	-0.488	-0.314	-0.898	0.741	0.389	-0.314	2.147	0.741	-1.095	1.092	-0.314	-0.663	-1.212	2.147	2.147	0.038	-1.268

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aqu_A_155	1aqu	A	155	182	FSEFVEKFMQGQVPYGSWYDHVKAWWEK	HHHHHHHHHHT-STT--HHHHHHHHHHH	aaaaaaaaaavabpvexaaaaaaaaaaa
1cjm_A_155	1cjm	A	155	182	WDSFLEKFMAGEVSYGSWYQHVQEWWEL	HHHHHHHHHTT-STT--HHHHHHHHHHH	aaaaaaaaaavabpvepaaaaaaaaaaa
1g3m_A_154	1g3m	A	154	181	FPEFVEKFMQGQVPYGSWYKHVKSWWEK	HHHHHHHHHTT-STTS-HHHHHHHHHHH	aaaaaaaaaavabpvexaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1aqu_A_155	1aqu	A	ESTESTRADIOL	Y - 169
1g3m_A_154	1g3m	A	PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL	Y - 168
1g3m_A_154	1g3m	A	EDO1,2-ETHANEDIOL	K - 173
1g3m_A_154	1g3m	A	EDO1,2-ETHANEDIOL	K - 176
1g3m_A_154	1g3m	A	EDO1,2-ETHANEDIOL	S - 177
1g3m_A_154	1g3m	A	EDO1,2-ETHANEDIOL	W - 178
1g3m_A_154	1g3m	A	EDO1,2-ETHANEDIOL	E - 180

Clusters included in this Subclass