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Information on SUBCLASS 8.2.1
Subclass Accession number: 9175
Subclass: 8.2.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 24.9 +/- 19.5
Average RMSD (Å) : 0.830 +/- 0.327

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXXPhXRhhphp
(φψ)-conformation: aapaalbppbaa
Pattern: [deky]xx[adenr][adegknq][ACFILV]x[adekqs]xx[APT][afilm][GKR][KRY][afilmtv][AGSV][egkrt][AIPV][ekpq][DE][ILV][AGSTV][AGNR]x[AIV][acil][FWY]
Conservation:-0.211-1.136-1.028-0.902-0.564-0.339-1.206-0.639-0.998-0.9291.768-0.1980.1941.252-0.4450.556-0.693-0.076-0.0362.0681.2990.050-0.279-0.4890.592-0.1102.496
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ae1_A_2201ae1   A221247EEIDNFIVKTPMGRAGKPQEVSALIAFHHHHHHHHHSTT-S-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1cyd_A_1941cyd   A195221EFARKLKERHPLRKFAEVEDVVNSILFHHHHHHHHHSTTSS-B-HHHHHHHHHHaaaaaaaaaxaalbxxxaaaaaaaaaa
1g0o_A_2321g0o   A235261VDEYAAVQWSPLRRVGLPIDIARVVCFHHHHHHHHS-TT-S-B-HHHHHHHHHHaaaaaaaaabaalbxxbaaaaaaaaaa
1gee_A_2031gee   A204230EQRADVESMIPMGYIGEPEEIAAVAAWHHHHHHHTT-TTSS-B-HHHHHHHHHHaaaaaaaaabaavbxxbaaaaaaaaaa
1geg_A_2071geg   A207233YGTAEFAKRITLGRLSEPEDVAACVSYHHHHHHHTT-TT-S-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1i01_A_1941i01   A195221DQRAGILAQVPAGRLGGAQEIANAVAFHHHHHHHTT-TTSS-B-HHHHHHHHHHaaaaaaaaabaavbxxxaaaaaaaaaa
1iy8_A_2151iy8   A217243KAAEEFIQVNPSKRYGEAPEIAAVVAFHHHHHHHTT-TT-S-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1k2w_A_2071k2w   A207233EKKRQVGAAVPFGRMGRAEDLTGMAIFHHHHHHHHHSTTSS-B-HHHHHHHHHHaaaaaaaaaxaagbxxbaaaaaaaaaa
1qsg_A_2031qsg   A205231KMLAHCEAVTPIRRTVTIEDVGNSAAFHHHHHHHHHSTTSS---HHHHHHHHHHaaaaaaaaaxaalbxxbaaaaaaaaaa
2ae2_A_2042ae2   A208234ENLNKLIDRCALRRMGEPKELAAMVAFHHHHHHHHTSTT-S-B-HHHHHHHHHHaaaaaaaaaxaalbxxbaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g0o_A_2321g0o   A     PYQPYROQUILON W - 243
1iy8_A_2151iy8   A     MPD2-METHYL-2,4-PENTANEDIOL F - 222
1iy8_A_2151iy8   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 231
1qsg_A_2031qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 203
1qsg_A_2031qsg   A     TCLTRICLOSAN F - 203
1qsg_A_2031qsg   A     TCLTRICLOSAN M - 206
2ae2_A_2042ae2   A     PTOPSEUDOTROPINE Q - 206
2ae2_A_2042ae2   A     PTOPSEUDOTROPINE L - 210
2ae2_A_2042ae2   A     PTOPSEUDOTROPINE L - 213
2ae2_A_2042ae2   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 222

Clusters included in this Subclass
CLUSTER: HH.8.10
CLUSTER: HH.9.2