Information on SUBCLASS 8.2.1 |
Subclass Accession number: 9175
Subclass: 8.2.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 24.9 +/- 19.5 Average RMSD (Å) : 0.830 +/- 0.327 Consensus geometry
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Consensus Sequence: | XXXPhXRhhphp |
(φψ)-conformation: | aapaalbppbaa |
Pattern: | [deky] | x | x | [adenr] | [adegknq] | [ACFILV] | x | [adekqs] | x | x | [APT] | [afilm] | [GKR] | [KRY] | [afilmtv] | [AGSV] | [egkrt] | [AIPV] | [ekpq] | [DE] | [ILV] | [AGSTV] | [AGNR] | x | [AIV] | [acil] | [FWY] |
Conservation: | -0.211 | -1.136 | -1.028 | -0.902 | -0.564 | -0.339 | -1.206 | -0.639 | -0.998 | -0.929 | 1.768 | -0.198 | 0.194 | 1.252 | -0.445 | 0.556 | -0.693 | -0.076 | -0.036 | 2.068 | 1.299 | 0.050 | -0.279 | -0.489 | 0.592 | -0.110 | 2.496 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ae1_A_220 | 1ae1 | A | 221 | 247 | EEIDNFIVKTPMGRAGKPQEVSALIAF | HHHHHHHHHSTT-S-B-HHHHHHHHHH | aaaaaaaaaxaavbxxbaaaaaaaaaa |
1cyd_A_194 | 1cyd | A | 195 | 221 | EFARKLKERHPLRKFAEVEDVVNSILF | HHHHHHHHHSTTSS-B-HHHHHHHHHH | aaaaaaaaaxaalbxxxaaaaaaaaaa |
1g0o_A_232 | 1g0o | A | 235 | 261 | VDEYAAVQWSPLRRVGLPIDIARVVCF | HHHHHHHHS-TT-S-B-HHHHHHHHHH | aaaaaaaaabaalbxxbaaaaaaaaaa |
1gee_A_203 | 1gee | A | 204 | 230 | EQRADVESMIPMGYIGEPEEIAAVAAW | HHHHHHHTT-TTSS-B-HHHHHHHHHH | aaaaaaaaabaavbxxbaaaaaaaaaa |
1geg_A_207 | 1geg | A | 207 | 233 | YGTAEFAKRITLGRLSEPEDVAACVSY | HHHHHHHTT-TT-S-B-HHHHHHHHHH | aaaaaaaaaxaavbxxbaaaaaaaaaa |
1i01_A_194 | 1i01 | A | 195 | 221 | DQRAGILAQVPAGRLGGAQEIANAVAF | HHHHHHHTT-TTSS-B-HHHHHHHHHH | aaaaaaaaabaavbxxxaaaaaaaaaa |
1iy8_A_215 | 1iy8 | A | 217 | 243 | KAAEEFIQVNPSKRYGEAPEIAAVVAF | HHHHHHHTT-TT-S-B-HHHHHHHHHH | aaaaaaaaaxaavbxxbaaaaaaaaaa |
1k2w_A_207 | 1k2w | A | 207 | 233 | EKKRQVGAAVPFGRMGRAEDLTGMAIF | HHHHHHHHHSTTSS-B-HHHHHHHHHH | aaaaaaaaaxaagbxxbaaaaaaaaaa |
1qsg_A_203 | 1qsg | A | 205 | 231 | KMLAHCEAVTPIRRTVTIEDVGNSAAF | HHHHHHHHHSTTSS---HHHHHHHHHH | aaaaaaaaaxaalbxxbaaaaaaaaaa |
2ae2_A_204 | 2ae2 | A | 208 | 234 | ENLNKLIDRCALRRMGEPKELAAMVAF | HHHHHHHHTSTT-S-B-HHHHHHHHHH | aaaaaaaaaxaalbxxbaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g0o_A_232 | 1g0o | A | PYQPYROQUILON | W - 243 |
1iy8_A_215 | 1iy8 | A | MPD2-METHYL-2,4-PENTANEDIOL | F - 222 |
1iy8_A_215 | 1iy8 | A | MPD2-METHYL-2,4-PENTANEDIOL | Y - 231 |
1qsg_A_203 | 1qsg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 203 |
1qsg_A_203 | 1qsg | A | TCLTRICLOSAN | F - 203 |
1qsg_A_203 | 1qsg | A | TCLTRICLOSAN | M - 206 |
2ae2_A_204 | 2ae2 | A | PTOPSEUDOTROPINE | Q - 206 |
2ae2_A_204 | 2ae2 | A | PTOPSEUDOTROPINE | L - 210 |
2ae2_A_204 | 2ae2 | A | PTOPSEUDOTROPINE | L - 213 |
2ae2_A_204 | 2ae2 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | M - 222 |
Clusters included in this Subclass |
CLUSTER: HH.8.10 |
CLUSTER: HH.9.2 |