ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.3.2

Subclass Accession number: 9177
Subclass: 8.3.2

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7.7 (>50 %) 2.7.7.7
SCOP : 56671 (>50 %) 56672 (>50 %) 56673 (>50 %)

Number of loops: 3

Average sequence ID (%) : 19.8 +/- 23.7
Average RMSD (Å) : 0.767 +/- 0.306

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	hhXhXXppVpXX
(φψ)-conformation:	aalbpaaappaa

Pattern:	[IL]	x	[RT]	[AKL]	[FT]	[AV]	x	x	[CIV]	[FV]	[GQT]	[ALV]	[EPS]	x	[DEH]	[ET]	[V]	[ST]	[APS]	x	x	[FR]	x	[QSW]	[AY]	[KV]	[AK]
Conservation:	1.513	1.066	0.679	-1.274	0.146	0.452	-1.274	-1.274	0.464	0.759	-1.150	-0.405	-0.405	-1.398	0.712	0.679	2.574	1.401	-0.281	-1.522	-0.033	-0.384	-0.190	-0.653	-0.105	-0.190	0.090

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1l3s_A_681	1l3s	A	681	707	IHTKTAMDIFQVSEDEVTPNMRRQAKA	HHHHHHHHHTT--GGG--HHHHHHHHH	aaaaaaaaaalbxaaaxxaaaaaaaaa
1oja_A_159	1oja	A	164	190	LATLFVNLCVTAETHEVSALWFLWYVK	HHHHHHHHHHSS-TTTSBHHHHHHHHH	aaaaaaaaaalbxaaabxaaaaaaaaa
2kfn_A_733	2kfn	A	733	759	IHRATAAEVFGLPLETVTSEQRRSAKA	HHHHHHHHHTT--GGG--HHHHHHHHH	aaaaaaaaaalbpaaapxaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1oja_A_159	1oja	A	AC2ISN BINDING SITE FOR CHAIN A	L - 171

Clusters included in this Subclass