ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.6.1

Subclass Accession number: 9200
Subclass: 9.6.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 53.8 +/- 22.6
Average RMSD (Å) : 0.575 +/- 0.096

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	cpphcppFXPpXX
(φψ)-conformation:	aapaabpbpppaa

Pattern:	[K]	[FY]	[I]	[E]	[NQ]	[Q]	[IV]	[GKQ]	[EKT]	[NR]	[AFV]	[DNY]	[KR]	[DT]	[EF]	x	[P]	[NS]	x	[AK]	[ITV]	[IL]	[DS]	[L]	[E]	[EN]
Conservation:	1.217	1.187	0.616	1.217	-0.140	1.217	0.324	-1.127	-0.916	-0.140	-1.252	-1.051	0.361	-0.270	-0.758	-1.382	2.419	-0.052	-1.513	-0.741	-0.695	0.031	-0.344	0.616	1.217	-0.040

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bry_Y_165	1bry	Y	165	190	KFIEQQIGKRVDKTFLPSLATISLEN	HHHHHHHHH-SSS-B---HHHHHHHH	aaaaaaaaaxaabbbxxxaaaaaaaa
1gik_A_180	1gik	A	180	205	KYIENQVKTNFNRDFSPNDKVLDLEE	HHHHHHHHHTSSS-B---HHHHHHHH	aaaaaaaaabaabxbxxxaaaaaaaa
1mrg_*_165	1mrg	-	165	190	KYIEQQIQERAYRDEVPSLATISLEN	HHHHHHHHTTSSS-B---HHHHHHHH	aaaaaaaaaaaabxbxxxaaaaaaaa
1mrj_*_165	1mrj	-	165	190	KFIEQQIGKRVDKTFLPSLAIISLEN	HHHHHHHHT-SS--B---HHHHHHHH	aaaaaaaaaxaabbbxxxaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mrg_*_165	1mrg	*	ADNADENOSINE	E - 189

Clusters included in this Subclass