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Information on SUBCLASS 9.17.1
Subclass Accession number: 9211
Subclass: 9.17.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 28.6 +/- 24.6
Average RMSD (Å) : 1.600 +/- 0.700

Consensus geometry
d (Å): 19 delta (°): 90-135 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: LccXXhXphhXpX
(φψ)-conformation: aalppaaaabpaa
Pattern: [CG][IT][EQ][HIV][ER][CR][DR][HM][L][DN][DG][EGK]x[FW]x[DHS][LY][LV][PS][EKT]x[KV]x[DE]x[I][DKR][EK]
Conservation:-0.031-0.2031.067-0.8480.308-0.305-0.320-0.0571.4211.2060.492-0.848-1.6332.464-1.371-0.499-0.0830.3630.345-0.586-1.022-0.726-1.1051.467-1.1051.421-0.4990.687
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ej2_A_1321ej2   A132159GTEVRRRMLDDGDWRSLLPESVVEVIDEHHHHHHHHHHT---GGGS-HHHHHHHHHaaaaaaaaaavxxaaaabpaaaaaaaaa
1f9a_A_1261f9a   A126153GTEIRRRMLNGEKWEHLVPKAVVDVIKEHHHHHHHHHHT---GGGS-HHHHHHHHHaaaaaaaaaavxxaaaabxaaaaaaaaa
1n5n_A_1261n5n   A131158CIQHECDHLNGKLFVDYLSTLKRDRIRKHHHHHHHHHBT--GGGGS-HHHHHHHHHaaaaaaaaaavbbaaaaxpaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ej2_A_1321ej2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 132
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 126
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 127
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 128
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE R - 130
1n5n_A_1261n5n   A     GOLGLYCEROL L - 127
1n5n_A_1261n5n   A     GOLGLYCEROL V - 130
1n5n_A_1261n5n   A     GOLGLYCEROL C - 131
1n5n_A_1261n5n   A     GOLGLYCEROL I - 132
1n5n_A_1261n5n   A     ZNZINC ION H - 134
1n5n_A_1261n5n   A     GOLGLYCEROL H - 134
1n5n_A_1261n5n   A     ZNZINC ION E - 135
1n5n_A_1261n5n   A     GOLGLYCEROL E - 135
1n5n_A_1261n5n   A     ZNZINC ION H - 138
1n5n_A_1261n5n   A     ZNZINC ION L - 143
1n5n_A_1261n5n   A     ZNZINC ION F - 144

Clusters included in this Subclass
CLUSTER: HH.9.41