ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 10.3.1

Subclass Accession number: 9219
Subclass: 10.3.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 42.8 +/- 23.9
Average RMSD (Å) : 0.660 +/- 0.182

Consensus geometry

d (Å): 23

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	hphGppPYXXhpNp
(φψ)-conformation:	aallppplaappaa

Pattern:	[HST]	x	[S]	[D]	[IV]	[W]	[AS]	[FY]	[G]	[IV]	[LTV]	[LMV]	[W]	[E]	[ILV]	[AMY]	[ST]	[FLY]	[AG]	[EKS]	[KMQR]	[P]	[Y]	[DEQW]	[DEGR]	[FILM]	[PST]	[AN]	[EHQS]	[DEQ]	[ITV]	[ailm]	[EKNRS]	[afi]	[ILV]	x
Conservation:	-0.612	-1.000	0.325	1.085	0.167	2.983	-0.151	0.597	1.085	0.150	-0.572	-0.215	2.983	0.705	-0.128	-0.761	-0.111	-0.413	0.071	-0.434	-0.606	1.464	1.464	-0.799	-0.914	-0.479	-0.574	-0.269	-0.675	-0.056	-0.383	-0.935	-0.722	-1.115	-0.113	-1.041

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1jpa_A_813	1jpa	A	813	848	SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE	HHHHHHHHHHHHHHHHTTS--TTTT--HHHHHHHHH	aaaaaaaaaaaaaaaaalvxxpveapxaaaaaaaaa
1k2p_A_576	1k2p	A	576	611	SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA	HHHHHHHHHHHHHHHHTTS--TTTTS-HHHHHHHHH	aaaaaaaaaaaaaaaaavvxxxlaaxbaaaaaaaaa
1m14_A_869	1m14	A	869	904	HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE	HHHHHHHHHHHHHHHHTTS--TTSSS-HHHHHHHHH	aaaaaaaaaaaaaaaaalvxxwvaapxaaaaaaaaa
1mqb_A_796	1mqb	A	796	831	SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN	HHHHHHHHHHHHHHHHTTS--TTTT--HHHHHHHHH	aaaaaaaaaaaaaaaaalvxxpveaxxaaaaaaaaa
1p4o_A_1161	1p4o	A	1161	1196	TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM	HHHHHHHHHHHHHHHHHTS--TTTTS-HHHHHHHHH	aaaaaaaaaaaaaaaaavvxxxvaabxaaaaaaaaa

Clusters included in this Subclass