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Information on SUBCLASS 10.4.1
Subclass Accession number: 9220
Subclass: 10.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 58.4 +/- 21.0
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XhchpTppXXpLWK
(φψ)-conformation: aalppaabaaalaa
Pattern: [L][EK][DEK][V][AG]x[ckr][IM][DG][IL][DES][MT][HNR][KTY][lt][AST][DS][L][W][K][D][KQR][A][ALV][TV][E][IL][N][IKLV][A][V][IL][HY][S][FY][KQ][kl]
Conservation:0.409-0.030-0.4080.409-0.397-1.403-1.508-0.101-0.315-0.063-0.480-0.425-0.449-1.208-1.192-0.649-0.3940.4093.9390.9131.418-0.3000.409-0.896-0.4250.913-0.0631.418-1.0810.4090.409-0.0300.7850.4090.780-0.030-1.184
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d0c_A_3781d0c   A378414LEDVAVCMDLDTRTTSSLWKDKAAVEINLAVLHSFQLHHHHHHHTT--TT-GGG-HHHHHHHHHHHHHHHHHHHaaaaaaaalxxaabaaavaaaaaaaaaaaaaaaaaaa
1jwk_A_3861jwk   A386422LEEVGRRMGLETHTLASLWKDRAVTEINVAVLHSFQKHHHHHHHTT--TT-GGG-HHHHHHHHHHHHHHHHHHHaaaaaaaavbxaabaaavaaaaaaaaaaaaaaaaaaa
1m7v_A_2541m7v   A254290LKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKHHHHHHHTT---S-GGGTHHHHHHHHHHHHHHHHHHHaaaaaaaavbxaabaaalaaaaaaaaaaaaaaaaaaa
1om4_A_6071om4   A607643LEEVAKKMDLDMRKTSSLWKDQALVEINIAVLYSFQSHHHHHHHHT---S-GGG-HHHHHHHHHHHHHHHHHHHaaaaaaaavxxaabaaalaaaaaaaaaaaaaaaaaaa
4nos_A_3924nos   A392428LEEVGRRMGLETHKLASLWKDQAVVEINIAVIHSFQKHHHHHHHTT--TT-GGGTHHHHHHHHHHHHHHHHHHHaaaaaaaavxxaabaaavaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d0c_A_3781d0c   A     CADCACODYLIC ACID D - 380
1d0c_A_3781d0c   A     CADCACODYLIC ACID V - 383
1d0c_A_3781d0c   A     CADCACODYLIC ACID C - 384
1d0c_A_3781d0c   A     CADCACODYLIC ACID M - 385
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL N - 413
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL V - 414
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL A - 415
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL L - 417
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL H - 418
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL S - 419
1jwk_A_3861jwk   A     EGLETHYLENE GLYCOL Q - 421

Clusters included in this Subclass
CLUSTER: HH.10.13