Logo
Information on SUBCLASS 10.9.1
Subclass Accession number: 9225
Subclass: 10.9.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 19.9 +/- 19.0
Average RMSD (Å) : 1.000 +/- 0.200

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXGhXXXXhphchX
(φψ)-conformation: aagbbpplpbbbaa
Pattern: [CI][IPV][PS][KS][AK][ALV][LM]x[NS][AST]xx[HRY][HSY][E]x[AKM][EHK]xx[AEK]x[HMY][G][FI][EKP][AS][CEK][EGN][GV][KT][FI][DN][FVW]x[AKV][IMV]x[AE][KRW][KR][AD][ANS][IVY][V][KS][KNR][L][NT][AG][GI][IVY][AEQ][GNT]x[FL][KT]
Conservation:1.601-0.7010.8580.5400.116-0.6051.023-1.6680.737-0.121-0.895-1.2810.169-0.1212.585-1.475-0.991-0.025-0.991-0.798-0.605-0.895-0.0253.4560.330-0.3150.494-1.088-0.508-0.8920.1430.3301.420-0.315-0.991-1.0880.459-0.9910.116-0.5081.364-0.485-0.411-0.1211.7150.4280.1691.7150.6710.770-0.859-0.121-0.411-0.508-0.8920.3480.143
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ebd_A_521ebd   A52108CIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKHHHHHHHHHHHHHHHHHHT-GGGT----S----HHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaaavbbxbvxbbxaaaaaaaaaaaaaaaaaaaaaaaa
1lpf_A_531lpf   A54110IPSKALLDSSYKYHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKHHHHHHHHHHHHHHHHHHTSGGGT---SS----HHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaaavbbxxlxbbbaaaaaaaaaaaaaaaaaaaaaaaa
3grs_*_633grs   -63119CVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTHHHHHHHHHHHHHHHHHHTTGGGTS--------HHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaaagbxpxabxxbaaaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ebd_A_521ebd   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 52
1ebd_A_521ebd   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 53
1ebd_A_521ebd   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 55
1ebd_A_521ebd   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 56
1lpf_A_531lpf   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 53
1lpf_A_531lpf   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 54
1lpf_A_531lpf   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 56
1lpf_A_531lpf   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 57
3grs_*_633grs   *     FADFLAVIN-ADENINE DINUCLEOTIDE C - 63
3grs_*_633grs   *     FADFLAVIN-ADENINE DINUCLEOTIDE V - 64
3grs_*_633grs   *     FADFLAVIN-ADENINE DINUCLEOTIDE K - 66

Clusters included in this Subclass
CLUSTER: HH.14.7