Information on SUBCLASS 10.12.1 |
Subclass Accession number: 9228
Subclass: 10.12.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 37.1 +/- 18.7 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | ppXKhhhGpXhphX |
(φψ)-conformation: | aababaaeabpbaa |
Pattern: | [LV] | [ADP] | x | x | [EKL] | [AEN] | [K] | [L] | [AK] | [KS] | [KV] | [FL] | x | [VY] | [IY] | [EN] | [AD] | x | [L] | [KST] | [EK] | x | [K] | [CY] | [LV] | [AC] | [G] | [DE] | x | [FL] | [ST] | [LV] | [AT] | [D] | [AL] |
Conservation: | 0.036 | -1.011 | -0.718 | -1.312 | -1.237 | -1.011 | 1.701 | 1.023 | -0.273 | -0.060 | -0.835 | -0.061 | -1.011 | -0.273 | 0.076 | 0.172 | -0.719 | -1.047 | 1.023 | -0.634 | 0.445 | -1.388 | 1.701 | 0.328 | 0.036 | 0.288 | 2.379 | 1.033 | -1.011 | 0.341 | 0.371 | 0.036 | -0.143 | 2.379 | -0.622 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1axd_A_129 | 1axd | A | 132 | 166 | VDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADL | HHHHHHHHHHHHHHHHHHHHH-SSSSSSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeabxbaaaa |
1gnw_A_133 | 1gnw | A | 136 | 170 | VAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDL | HHHHHHHHHHHHHHHHHHHTT-SSSSSSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeabxbaaaa |
1pmt_*_122 | 1pmt | - | 122 | 156 | LPVVKNKLKSKFVYINDVLSKQKCVCGDHFTVADA | HHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeaxxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gnw_A_133 | 1gnw | A | GTXS-HEXYLGLUTATHIONE | K - 142 |
1pmt_*_122 | 1pmt | * | GTTGLUTATHIONE | Y - 157 |
Clusters included in this Subclass |
CLUSTER: HH.11.26 |