ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 12.3.1

Subclass Accession number: 9246
Subclass: 12.3.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 75.8 +/- -36.2
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry

d (Å): 5

delta (°): 0-45

theta (°): 45-90

rho (°): 45-90

Consensus Sequence:	GFLALXGpXEAPGNhG
(φψ)-conformation:	aapbbpgpaabaelaa

Pattern:	[G]	[AT]	[FL]	[G]	[F]	[L]	[A]	[L]	[HP]	[G]	[NS]	[PQR]	[E]	[A]	[P]	[G]	[N]	[MV]	[G]	[L]	[FL]	[D]	[Q]	[QR]	[LM]	[A]	[L]	[Q]	[W]	[V]	[HQ]	[DEK]	[N]
Conservation:	0.810	-1.195	-0.993	0.810	0.810	-0.252	-0.252	-0.252	-0.914	0.810	-0.821	-1.609	0.279	-0.252	1.341	0.810	0.810	-0.932	0.810	-0.252	-1.084	0.810	0.279	-0.775	-0.672	-0.252	-0.252	0.279	3.464	-0.252	-0.718	-1.196	0.810

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ea5_A_151	1ea5	A	151	183	GAFGFLALHGSQEAPGNVGLLDQRMALQWVHDN	HHHHH---TT-SSS-S-HHHHHHHHHHHHHHHH	eaaaapbbpgxaabaevaaaaaaaaaaaaaaaa
1n5m_A_154	1n5m	A	154	186	GTFGFLALPGSREAPGNVGLLDQRLALQWVQEN	HHHHH---TT-SS--S-HHHHHHHHHHHHHHHH	eaaaaxbbpgxaabaelaaaaaaaaaaaaaaaa
1p0i_A_149	1p0i	A	149	181	GALGFLALPGNPEAPGNMGLFDQQLALQWVQKN	HHHHH---TT-TTS-S-HHHHHHHHHHHHHHHH	eaaaapbbpgxaabweUaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass