Information on SUBCLASS 14.4.1 |
Subclass Accession number: 9251
Subclass: 14.4.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 57.0 +/- -0.7 Average RMSD (Å) : 0.467 +/- 0.208 Consensus geometry
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Consensus Sequence: | XccXShNHEYLhIXGLhp |
(φψ)-conformation: | aapaapbappppaaepaa |
Pattern: | [P] | [SV] | [V] | [KR] | [AK] | [AV] | [E] | [KQ] | x | [I] | x | [GN] | [DN] | [GS] | [S] | [LY] | [N] | [H] | [E] | [Y] | [L] | [GP] | [I] | [LT] | [G] | [L] | [AP] | [ES] | [FL] | [RT] | [AST] | [CN] | [A] | [AS] | [KR] | [IL] | [AI] | [FL] |
Conservation: | 2.143 | -1.397 | 0.364 | 0.076 | -0.925 | -0.810 | 0.957 | -0.217 | -1.245 | 0.364 | -0.915 | -0.133 | 0.131 | -0.583 | 0.364 | -0.742 | 1.550 | 2.736 | 0.957 | 2.143 | 0.364 | -0.620 | 0.364 | -0.983 | 1.550 | 0.364 | -0.408 | -0.631 | -0.453 | -0.804 | -0.887 | -0.724 | 0.364 | -0.516 | 0.076 | -0.203 | -1.104 | -0.569 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ajs_A_51 | 1ajs | A | 51 | 88 | PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLAL | HHHHHHHHHHHT-TT-------TT--HHHHHHHHHHHH | aaaaaaaaaaaabaaxbaxpxwaaexaaaaaaaaaaaa |
1yaa_A_51 | 1yaa | A | 51 | 88 | PSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIF | HHHHHHHHHHHT-TT-------TT--HHHHHHHHHHHH | aaaaaaaaaaaaxaaxbaxxxxaaexaaaaaaaaaaaa |
2cst_A_51 | 2cst | A | 51 | 88 | PVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIAL | HHHHHHHHHHHH-TT-------TT--HHHHHHHHHHHH | aaaaaaaaaaaaxaaxbaxpxxaaexaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ajs_A_51 | 1ajs | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | Y - 70 |
1yaa_A_51 | 1yaa | A | MAEMALEIC ACID | Y - 70 |
1yaa_A_51 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 70 |
Clusters included in this Subclass |
CLUSTER: HH.14.3 |