ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 16.4.1

Subclass Accession number: 9256
Subclass: 16.4.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 71.9 +/- -28.2
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	VGXXhXDhFGXAXRpXLDPV
(φψ)-conformation:	aapagpbaabppabppppaa

Pattern:	[L]	[W]	[T]	[V]	[G]	[NW]	x	[AG]	[AR]	[D]	[AP]	[F]	[G]	[DV]	[A]	[TV]	[R]	[EKT]	[ANR]	[L]	[D]	[P]	[V]	[EY]	[AV]	[V]	[H]	[K]	[L]	[A]	[E]	[IL]
Conservation:	-0.049	3.102	0.401	-0.049	0.851	-0.672	-1.450	-0.650	-1.007	0.851	-0.728	0.851	0.851	-1.303	-0.049	-0.798	0.401	-1.200	-1.400	-0.049	0.851	1.301	-0.049	-0.978	-0.938	-0.049	1.751	0.401	-0.049	-0.049	0.401	-0.492

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bxb_A_14	1bxb	A	14	45	LWTVGNVGRDPFGDAVRERLDPVYVVHKLAEL	HHHHT----BTTB---S----HHHHHHHHHHH	aaaaapavxbaabxpabxxxxaaaaaaaaaaa
1xim_A_15	1xim	A	15	46	LWTVGWQARDAFGDATRTALDPVEAVHKLAEI	HHHHT----BTTB--SS----HHHHHHHHHHH	aaaaaxavxbaabxxabxxxxaaaaaaaaaaa
1xla_A_14	1xla	A	14	45	LWTVGWTGADPFGVATRKNLDPVEAVHKLAEL	HHHHT----BTTB--SS----HHHHHHHHHHH	aaaaaxagxbaabxpabxxxxaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass