ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 22.1.1

Subclass Accession number: 9263
Subclass: 22.1.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 80.0 +/- -46.0
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry

d (Å): 25

delta (°): 135-180

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	KXXFNQXNWPVpAGHPChhCSEPcFW
(φψ)-conformation:	aaebllNbbaaaalbppalaabplaa

Pattern:	[C]	[P]	[K]	x	[KL]	[F]	[N]	[Q]	[TV]	[N]	[W]	[P]	[V]	[DQ]	[A]	[G]	[H]	[P]	[C]	[IL]	[AG]	[C]	[S]	[E]	[P]	[DN]	[F]	[W]	[D]	[ALT]
Conservation:	1.275	0.544	-0.187	-1.649	-1.565	0.179	0.179	-0.187	-1.201	0.179	2.006	0.544	-0.552	-1.017	-0.552	0.179	0.910	0.544	1.275	-0.914	-1.058	1.275	-0.552	-0.187	0.544	-0.727	0.179	2.006	0.179	-1.649

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1frf_S_227	1frf	S	227	256	CPKVLFNQVNWPVQAGHPCLGCSEPDFWDT	HHHH-BTTTB-GGGGT-----TTSTTHHHH	aaaaebvvNbbaaaavbxxavaabplaaaa
1ubk_S_231	1ubk	S	231	260	CPKIKFNQTNWPVDAGHPCIGCSEPDFWDA	HHHH-BTTTB-TGGGT-----TTSTTHHHH	aaaaeblvNbbaaaavbxxavaabxlaaaa
2frv_A_228	2frv	A	228	257	CPKQLFNQVNWPVQAGHPCIACSEPNFWDL	HHHH-BTTTB-GGGGT-----TTSTTHHHH	aaaaeblvabbaaaavbxxalaabplaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1frf_S_227	1frf	S	FEFE (III) ION	C - 227
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	C - 227
1frf_S_227	1frf	S	FEFE (III) ION	F - 232
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	F - 232
1frf_S_227	1frf	S	FEFE (III) ION	W - 237
1frf_S_227	1frf	S	FS4IRON/SULFUR CLUSTER	W - 237
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	W - 237
1frf_S_227	1frf	S	FEFE (III) ION	P - 238
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	P - 238
1frf_S_227	1frf	S	FEFE (III) ION	V - 239
1frf_S_227	1frf	S	FS4IRON/SULFUR CLUSTER	V - 239
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	V - 239
1frf_S_227	1frf	S	FEFE (III) ION	P - 244
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	P - 244
1frf_S_227	1frf	S	FEFE (III) ION	C - 245
1frf_S_227	1frf	S	FS4IRON/SULFUR CLUSTER	C - 245
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	C - 245
1frf_S_227	1frf	S	FEFE (III) ION	L - 246
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	L - 246
1frf_S_227	1frf	S	FEFE (III) ION	G - 247
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	G - 247
1frf_S_227	1frf	S	FEFE (III) ION	C - 248
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	C - 248
1frf_S_227	1frf	S	FEFE (III) ION	S - 249
1frf_S_227	1frf	S	FS3FE3-S4 CLUSTER	S - 249
1frf_S_227	1frf	S	FEFE (III) ION	W - 254
1frf_S_227	1frf	S	FS4IRON/SULFUR CLUSTER	W - 254
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	C - 231
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	F - 236
1ubk_S_231	1ubk	S	FS4IRON/SULFUR CLUSTER	W - 241
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	W - 241
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	P - 242
1ubk_S_231	1ubk	S	FS4IRON/SULFUR CLUSTER	V - 243
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	V - 243
1ubk_S_231	1ubk	S	FS4IRON/SULFUR CLUSTER	P - 248
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	P - 248
1ubk_S_231	1ubk	S	FS4IRON/SULFUR CLUSTER	C - 249
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	C - 249
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	I - 250
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	G - 251
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	C - 252
1ubk_S_231	1ubk	S	FS3FE3-S4 CLUSTER	S - 253
1ubk_S_231	1ubk	S	FS4IRON/SULFUR CLUSTER	W - 258
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	C - 228
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	F - 233
2frv_A_228	2frv	A	FS4IRON/SULFUR CLUSTER	W - 238
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	W - 238
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	P - 239
2frv_A_228	2frv	A	FS4IRON/SULFUR CLUSTER	V - 240
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	V - 240
2frv_A_228	2frv	A	FS4IRON/SULFUR CLUSTER	P - 245
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	P - 245
2frv_A_228	2frv	A	FS4IRON/SULFUR CLUSTER	C - 246
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	C - 246
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	I - 247
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	A - 248
2frv_A_228	2frv	A	FS3FE3-S4 CLUSTER	S - 250
2frv_A_228	2frv	A	FS4IRON/SULFUR CLUSTER	W - 255

Clusters included in this Subclass

CLUSTER: HH.21.2