Information on SUBCLASS 25.2.1 |
Subclass Accession number: 9266
Subclass: 25.2.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1.1 (>75 %) 3.1.1.4 GO : GO:0005509 (>75 %) GO:0016298 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) SCOP : 48618 (>75 %) 48619 (>75 %) 48623 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 44.2 +/- 0.0 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | ChGXRXhXAYhcYGChCGXGGpGpPXDXh |
(φψ)-conformation: | aapappaaaaabbeaapepeebeppabaa |
Pattern: | [IL] | [IL] | [EQ] | [FL] | [AK] | [GN] | [MT] | [IV] | [GQ] | [C] | [AV] | [G] | [PT] | [R] | [PT] | [PW] | [IT] | [A] | [Y] | [MV] | [KN] | [Y] | [G] | [C] | [FY] | [C] | [G] | [KL] | [G] | [G] | [HS] | [G] | [QT] | [P] | x | [D] | [AE] | [IL] | [D] | [RW] | [C] | [C] | [HY] | [GT] | [H] | [D] | [CN] | [C] | [Y] | [NT] | [ER] | [A] |
Conservation: | -0.575 | -0.575 | -0.374 | -0.777 | -1.079 | -0.575 | -0.978 | -0.374 | -1.079 | 1.843 | -0.978 | 0.634 | -0.777 | 0.231 | -0.777 | -0.777 | -1.079 | -0.172 | 1.037 | -0.676 | -0.676 | 1.037 | 0.634 | 1.843 | 0.130 | 1.843 | 0.634 | -1.281 | 0.634 | 0.634 | -0.777 | 0.634 | -0.978 | 1.037 | -1.482 | 0.634 | -1.079 | -0.575 | 0.634 | -0.777 | 1.843 | 1.843 | 0.130 | -1.079 | 1.440 | 0.634 | -0.878 | 1.843 | 1.037 | -0.676 | -0.777 | -0.172 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fe5_A_2 | 1fe5 | A | 2 | 53 | LIQFKNMIQCAGTRPWTAYVNYGCYCGKGGSGTPVDELDRCCYTHDNCYNEA | HHHHHHHHHHH-SS-GGGGTTBTTTBSSS--S---SHHHHHHHHHHHHHHHH | aaaaaaaaaaabaxwaaaaabbeaaxepeebebpabaaaaaaaaaaaaaaaa |
1le6_A_2 | 1le6 | A | 2 | 53 | ILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRA | HHHHHHHHHHHSSS-GGGGSSBTTTBSSS--S---SHHHHHHHHHHHHHHHH | aaaaaaaaaaaxabpaaaaabbeaaxepeebexpabaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fe5_A_2 | 1fe5 | A | CACALCIUM ION | G - 30 |
1fe5_A_2 | 1fe5 | A | CACALCIUM ION | G - 33 |
1le6_A_2 | 1le6 | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 18 |
1le6_A_2 | 1le6 | A | MPD2-METHYL-2,4-PENTANEDIOL | M - 21 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | C - 25 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | F - 26 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | C - 27 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | G - 28 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | L - 29 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | G - 31 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | C - 43 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | D - 47 |
Clusters included in this Subclass |
CLUSTER: HH.24.0 |