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Information on SUBCLASS 26.1.1
Subclass Accession number: 9267
Subclass: 26.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 82.5 +/- -51.8
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry
d (Å): 29 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: pcTPGhLAYXSLRLSYLPRPDGXXITDDMY
(φψ)-conformation: aabppaapaaeappabbwbwalaababpaa
Pattern: [QS][D][T][L]x[DQ][A][T][NS][DN][T][P][G][FV][L][A][Y][PS][S][L][R][L][S][Y][L][P][R][P][D][G][KTV]x[I][T][D][D][M][Y][AK][L][V][R]
Conservation:-1.2630.8970.323-0.251-2.291-0.956-0.2510.323-0.803-0.5360.3231.4700.897-1.376-0.251-0.2511.470-1.283-0.251-0.2510.323-0.251-0.2511.470-0.2511.4700.3231.4700.8970.897-2.036-1.682-0.2510.3230.8970.8970.3231.470-1.554-0.251-0.2510.323
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gz7_A_2831gz7   A283324QDTLYQATSDTPGVLAYPSLRLSYLPRPDGTFITDDMYALVRHHHHHHHHTTS--TTSTTTTS-SS-----SSSS-S-HHHHHHaaaaaaaaaabxxaaxaweaxpabbwbwavaababpaaaaaa
1llf_A_2831llf   A283324SDTLLDATNNTPGFLAYSSLRLSYLPRPDGKNITDDMYKLVRHHHHHHHHHTS--TTSTTTTS-SS-----SSSS-S-HHHHHHaaaaaaaaaabxxaaxaaeaxxabbwbwavaababpaaaaaa
1lpp_*_2831lpp   -283324SDTLEDATNNTPGFLAYSSLRLSYLPRPDGVNITDDMYALVRHHHHHHHHHTS--TTSTTTTS-SS-----SSSS-S-HHHHHHaaaaaaaaaabpxaaxaaeaxxabbwbwavaababpaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gz7_A_2831gz7   A     NAGN-ACETYL-D-GLUCOSAMINE P - 294
1gz7_A_2831gz7   A     NAGN-ACETYL-D-GLUCOSAMINE A - 298
1gz7_A_2831gz7   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 299
1gz7_A_2831gz7   A     NAGN-ACETYL-D-GLUCOSAMINE P - 300
1gz7_A_2831gz7   A     GOLGLYCEROL F - 314
1llf_A_2831llf   A     F23TRICOSANOIC ACID F - 296
1llf_A_2831llf   A     F23TRICOSANOIC ACID L - 297
1llf_A_2831llf   A     NAGN-ACETYL-D-GLUCOSAMINE S - 300
1llf_A_2831llf   A     F23TRICOSANOIC ACID S - 300
1llf_A_2831llf   A     F23TRICOSANOIC ACID S - 301
1llf_A_2831llf   A     F23TRICOSANOIC ACID L - 302
1llf_A_2831llf   A     NAGN-ACETYL-D-GLUCOSAMINE R - 303
1llf_A_2831llf   A     F23TRICOSANOIC ACID R - 303
1llf_A_2831llf   A     F23TRICOSANOIC ACID L - 304
1llf_A_2831llf   A     F23TRICOSANOIC ACID Y - 306
1llf_A_2831llf   A     F23TRICOSANOIC ACID L - 307
1llf_A_2831llf   A     F23TRICOSANOIC ACID P - 308
1llf_A_2831llf   A     NAGN-ACETYL-D-GLUCOSAMINE G - 312
1llf_A_2831llf   A     NAGN-ACETYL-D-GLUCOSAMINE K - 313
1llf_A_2831llf   A     NAGN-ACETYL-D-GLUCOSAMINE N - 314
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID F - 296
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID L - 297
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID Y - 299
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID S - 300
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID S - 301
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID L - 302
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID R - 303
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID L - 304
1lpp_*_2831lpp   *     HDS1-HEXADECANOSULFONIC ACID L - 307
1lpp_*_2831lpp   *     NAGN-ACETYL-D-GLUCOSAMINE V - 313
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gz7_A_2831gz7   A AC1NAG BINDING SITE FOR CHAIN AY - 299

Clusters included in this Subclass
CLUSTER: HH.27.1