Logo
Information on SUBCLASS 35.1.1
Subclass Accession number: 9270
Subclass: 35.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 65.4 +/- -15.6
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry
d (Å): 31 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: KcNPXTNYTXhPpEhMcpphSPFMRKGhXGDWKppFXXA
(φψ)-conformation: aapaaaalaappaaabpaaabpapaalbbgaaaaappaa
Pattern: x[F][KQ][E][M][K][KN][N][P]x[T][N][Y][T][MT][LMV][P][DEQ][E][FIM][M][DN][HQ][KS][ILV][S][P][F][M][R][K][G][IM][AIT][G][D][W][K][NT][HT][F][PT]x[A]x[NR][E][KR][F][D][AEK][DH][Y][AEK]
Conservation:-1.0000.831-0.6330.3400.3400.340-0.7260.8311.323-1.2690.3400.8311.3230.340-1.099-0.9711.323-0.8070.340-1.1900.340-0.384-0.580-0.974-0.807-0.1521.3230.8310.3400.3400.3400.831-0.783-1.6270.8310.8313.2890.340-0.726-0.9120.831-0.924-1.503-0.152-1.512-0.6950.340-0.3740.8310.831-1.463-0.5701.323-1.463
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqu_A_2291aqu   A230282.FQEMKNNPSTNYTMMPEEMMNQKVSPFMRKGIIGDWKNHFPEALRERFDEHYK.HHHHHH-TTTTTTTS-TTTB-TTTS-SS----S-GGGGT--HHHHHHHHHHHH.aaaaaaxaaaavaabpaaabxaaabxaxaavbbvaaaaaxxaaaaaaaaaaaa
1g3m_A_2281g3m   A229281.FQEMKNNPSTNYTTLPDEIMNQKLSPFMRKGITGDWKNHFTVALNEKFDKHYE.HHHHHH-TTTS-TTS-TTTB-TTTS-SS----S-GGGGTS-HHHHHHHHHHHH.aaaaaaxaaaaUaaxxaaabxaaabxaxaavbbgaaaaaxxaaaaaaaaaaaa
1ls6_A_2291ls6   A230282.FKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYA.HHHHHH-TTTS-TTS-TTTB-TTT--SS----SSGGGGTS-HHHHHHHHHHHH.aaaaaaxaaaavaaxpabNbbaaabxaxaavbbvaaaaaxxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 229
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Q - 230
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 232
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Y - 240
1aqu_A_2291aqu   A     ESTESTRADIOL Y - 240
1aqu_A_2291aqu   A     ESTESTRADIOL M - 243
1aqu_A_2291aqu   A     ESTESTRADIOL P - 244
1aqu_A_2291aqu   A     ESTESTRADIOL E - 246
1aqu_A_2291aqu   A     ESTESTRADIOL M - 247
1aqu_A_2291aqu   A     ESTESTRADIOL M - 248
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 255
1aqu_A_2291aqu   A     ESTESTRADIOL F - 255
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 256
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE R - 257
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 258
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE G - 259
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE I - 260
1aqu_A_2291aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 263
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 228
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Q - 229
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL Q - 229
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL E - 230
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 231
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL N - 233
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL N - 234
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL Y - 239
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL I - 246
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL M - 247
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE P - 253
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 254
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL F - 254
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 255
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE R - 256
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 257
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE G - 258
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE I - 259
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 262
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 230
1ls6_A_2291ls6   A     NPOP-NITROPHENOL Y - 240
1ls6_A_2291ls6   A     NPOP-NITROPHENOL V - 243
1ls6_A_2291ls6   A     NPOP-NITROPHENOL P - 244
1ls6_A_2291ls6   A     NPOP-NITROPHENOL F - 247
1ls6_A_2291ls6   A     NPOP-NITROPHENOL M - 248
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE P - 254
1ls6_A_2291ls6   A     NPOP-NITROPHENOL F - 255
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 260

Clusters included in this Subclass
CLUSTER: HH.34.1