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PDB code:

Information on SUBCLASS 1.1.7

Subclass Accession number: 943 Subclass: 1.1.7 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 49 Average sequence ID (%) : 8.6 +/- 11.3 Average RMSD (Å) : 0.494 +/- 0.206 Consensus geometry d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ad2_*_112	1ad2	-	112	123	AVVATPDVMGAV	EEEE-GGGHHHH	bbbbxaaaaaaa
1amu_A_139	1amu	A	139	150	MLLTQKHLVHLI	EEEE-GGGHHHH	bbxbbaaaaaaa
1aye_*_52	1aye	-	53	64	HVRVPFVNVQAV	EEEE-GGGHHHH	bbxbwaaaaaaa
1b93_A_13	1b93	A	15	26	ALVAHDHCKQML	EEEE-GGGHHHH	xbbbxaaaaaaa
1cb6_A_1598	1cb6	A	1598	1609	AVVSRMDKVERL	EEEE-GGGHHHH	bxbbxaaaaaaa
1chd_*_326	1chd	-	326	336	.EVVDLSQVSQQ	.EEE-GGGHHHH	.bbbxaaaaaaa
1cjw_A_155	1cjw	A	157	168	VLMCEDALVPFY	EEEE-GGGHHHH	bbbbxaaaaaaa
1cl1_A_221	1cl1	A	222	233	TAVCNARCWEQL	EEEE-TTTHHHH	bbxbxaaaaaaa
1cli_A_302	1cli	A	305	316	IIALPAPEVDKA	EEEE-GGGHHHH	bbbbwaaNaaaa
1dug_A_28	1dug	A	29	40	EHLYERDEGDKW	EEEE-TT-HHHH	bbxxxaaaaaaa
1eke_A_20	1eke	A	22	33	AFAIEKEREEEL	EEEE-GGGHHHH	bbbbxaaaaaaa
1elj_A_224	1elj	A	224	235	MMVNGPWSINDV	EEEE-GGGHHHH	bbxbbaaaaaaa
1ey3_A_211	1ey3	A	211	221	.KIFPVETLVEE	.EEE-TTTHHHH	.bbbwaaaaaaa
1ezv_B_237	1ezv	B	242	253	GIPVNKASLAQY	EEEE-SSTHHHH	bbwbxaaaaaaa
1fi4_A_307	1fi4	A	308	319	VLYYLAENESKL	EEEE-GGGHHHH	bbxbxaaaaaaa
1ga8_A_3	1ga8	A	4	15	VFAADDNYAAYL	EEEE-GGGHHHH	bbbbbaaaaaaa
1gx5_A_450	1gx5	A	451	462	CYSIEPLDLPQI	EEEE-GGGHHHH	bxbbxaaaaaaa
1h72_C_265	1h72	C	266	277	IAFPKEEFIDEV	EEEE-GGGHHHH	bbbxxaaaaaaa
1hye_A_28	1hye	A	30	41	VLIGREHSINKL	EEEE-GGGHHHH	bbbbxaaaaaaa
1i19_A_431	1i19	A	436	447	AVVTSRANIATV	EEEE-GGGHHHH	bbxbxaaaaaaa
1i6a_A_91	1i6a	A	94	105	HIGLIPTVGPYL	EEEE-TTTHHHH	bbbbxaaaaaaa
1i6l_A_140	1i6l	A	140	151	IVPVGEDQKQHI	EEE--GGGHHHH	bbxbxaaaaaaa
1iir_A_30	1iir	A	32	43	RMCAPPDCAERL	EEEE-GGGHHHH	bbxbwaaaaaaa
1iq8_A_509	1iq8	A	509	520	RVVVNKEAEPFA	EEEE-TTTHHHH	xbxbxaaaaaaa
1iyh_A_30	1iyh	A	31	42	DHRIEQADWPEI	EEEE-GGGHHHH	xxbxbaaaaaaa
1iz0_A_273	1iz0	A	274	285	GPVFPFAEAEAA	EEEEEGGGHHHH	Fwbbxaaaaaaa
1jv1_A_162	1jv1	A	163	174	YIMTSGRTMEST	EEEE-TTTHHHH	xbxbbaaNaaaa
1kbl_A_851	1kbl	A	851	862	YVSCSPFRVPIA	EEEE-GGGHHHH	bbbbxaaaaaaa
1kol_A_364	1kol	A	364	375	VQVISLDDAPRG	EEEE-GGGHHHH	pbxbxaaaaaaa
1lbv_A_236	1lbv	A	236	247	IVAANEKLHPKL	EEEE-TTTHHHH	bbbbxaaaaaaa
1lc0_A_67	1lc0	A	71	82	YICSESSSHEDY	EE-S-GGGHHHH	bxaxxaaaaaaa
1lci_*_125	1lci	-	125	136	VVFVSKKGLQKI	EEEE-GGGHHHH	bbxbxaaaaaaa
1lla_*_292	1lla	-	292	303	HKTLDELHGTDI	EEE--TTTHHHH	xbxxxaaaaaaa
1m44_A_113	1m44	A	115	126	ALSSSARARRLY	EEE--TTTHHHH	bbbbxaaaaaaa
1msw_D_813	1msw	D	813	824	SFGTIPADAANL	EEEE-GGGHHHH	bbbbxaaaaaaa
1o59_A_3	1o59	A	3	12	..FFSLADEAEF	..EE-GGGHHHH	..bbpaaaaaaa
1o89_A_296	1o89	A	296	306	.KEISLSEAPNF	.EEE-GGGHHHH	.xxbxaaaaaaa
1p35_A_102	1p35	A	103	114	VSCQNGSVLKSK	EEEEEGGGHHHH	bbbbxaaaaaaa
1qkk_A_79	1qkk	A	80	91	ILVTGHGDIPMA	EEEE-GGGHHHH	bxxbxaaaaaaa
1rzt_A_487	1rzt	A	491	502	IIVVPYSEFACA	EEE--GGGHHHH	bbbbxaaaaaaa
1sbp_*_2	1sbp	-	6	17	LNVSYDPTRELY	EEEE-STTHHHH	bbxbxaaaaaaa
1uir_A_52	1uir	A	52	63	DVQSTERDEYIY	EEEEETTTHHHH	bxabbaaaaaaa
1uoc_A_17	1uoc	A	17	27	.RDVWKSNLYSE	.EEE-TTTHHHH	.xxbbaaaaaaa
1uuf_A_316	1uuf	A	316	327	IEMIRADQINEA	EEEE-GGGHHHH	bbxbxaaaaaaa
1vk3_A_287	1vk3	A	287	297	.VVTSPQKASRI	.EEE-GGGHHHH	.bxbxaaaaaaa
2dap_*_46	2dap	-	46	55	..VFDVADVDKH	..EEEGGGHHHH	..bbxaaaaaaa
2pii_*_2	2pii	-	5	16	DAIIKPFKLDDV	EEEE-GGGHHHH	bbbbxaaaaaaa
2por_*_40	2por	-	42	53	GASFKAHESVGA	EEEEEGGGHHHH	bbbbxaaaaaaa
3mbp_*_222	3mbp	-	224	235	MTINGPWAWSNI	EEEE-GGGHHHH	bbbbbaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1b93_A_13	1b93	A	FMTFORMIC ACID	L - 16
1b93_A_13	1b93	A	FMTFORMIC ACID	V - 17
1b93_A_13	1b93	A	FMTFORMIC ACID	A - 18
1b93_A_13	1b93	A	FMTFORMIC ACID	H - 19
1b93_A_13	1b93	A	FMTFORMIC ACID	D - 20
1b93_A_13	1b93	A	FMTFORMIC ACID	K - 23
1b93_A_13	1b93	A	FMTFORMIC ACID	L - 26
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	L - 158
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	M - 159
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	C - 160
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	E - 161
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	A - 163
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	L - 164
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	F - 167
1cjw_A_155	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	Y - 168
1cl1_A_221	1cl1	A	LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE)	G - 221
1dug_A_28	1dug	A	GSHGLUTHATHIONE	W - 40
1dug_A_28	1dug	A	GSHGLUTHATHIONE	R - 41
1eke_A_20	1eke	A	MSESELENOMETHIONINE	V - 20
1eke_A_20	1eke	A	MSESELENOMETHIONINE	I - 25
1eke_A_20	1eke	A	MSESELENOMETHIONINE	E - 26
1eke_A_20	1eke	A	MSESELENOMETHIONINE	K - 27
1eke_A_20	1eke	A	MSESELENOMETHIONINE	E - 28
1elj_A_224	1elj	A	GLCGLUCOSE	W - 230
1fi4_A_307	1fi4	A	MSESELENOMETHIONINE	Y - 310
1fi4_A_307	1fi4	A	MSESELENOMETHIONINE	Y - 311
1fi4_A_307	1fi4	A	MSESELENOMETHIONINE	L - 312
1fi4_A_307	1fi4	A	MSESELENOMETHIONINE	A - 313
1ga8_A_3	1ga8	A	MSESELENOMETHIONINE	I - 3
1ga8_A_3	1ga8	A	UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE	F - 5
1ga8_A_3	1ga8	A	UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE	A - 6
1ga8_A_3	1ga8	A	UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE	A - 7
1ga8_A_3	1ga8	A	UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE	D - 8
1ga8_A_3	1ga8	A	UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE	N - 10
1ga8_A_3	1ga8	A	UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE	Y - 11
1ga8_A_3	1ga8	A	MSESELENOMETHIONINE	V - 22
1gx5_A_450	1gx5	A	MSESELENOMETHIONINE	I - 463
1gx5_A_450	1gx5	A	MSESELENOMETHIONINE	L - 466
1gx5_A_450	1gx5	A	MSESELENOMETHIONINE	H - 467
1hye_A_28	1hye	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	I - 32
1hye_A_28	1hye	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	G - 33
1hye_A_28	1hye	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	R - 34
1hye_A_28	1hye	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	E - 35
1hye_A_28	1hye	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	H - 36
1hye_A_28	1hye	A	NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	S - 37
1i19_A_431	1i19	A	EDO1,2-ETHANEDIOL	T - 431
1i19_A_431	1i19	A	EDO1,2-ETHANEDIOL	E - 432
1i19_A_431	1i19	A	FADFLAVIN-ADENINE DINUCLEOTIDE	E - 432
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	V - 141
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	V - 141
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	P - 142
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	V - 143
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	V - 143
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	G - 144
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	E - 145
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	D - 146
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	Q - 147
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	Q - 147
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	Q - 149
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	H - 150
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	H - 150
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	I - 151
1i6l_A_140	1i6l	A	TYMTRYPTOPHANYL-5'AMP	I - 151
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	L - 153
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	T - 154
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	F - 161
1i6l_A_140	1i6l	A	MSESELENOMETHIONINE	Y - 165
1iyh_A_30	1iyh	A	GSHGLUTHATHIONE	W - 39
1iyh_A_30	1iyh	A	GSHGLUTHATHIONE	K - 43
1jv1_A_162	1jv1	A	UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE	M - 165
1jv1_A_162	1jv1	A	UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE	S - 167
1kol_A_364	1kol	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	F - 379
1lc0_A_67	1lc0	A	PO4PHOSPHATE ION	S - 74
1lc0_A_67	1lc0	A	PO4PHOSPHATE ION	E - 75
1lc0_A_67	1lc0	A	PO4PHOSPHATE ION	Y - 82
1o59_A_3	1o59	A	MSESELENOMETHIONINE	F - 3
1uoc_A_17	1uoc	A	CACALCIUM ION	R - 32
1uoc_A_17	1uoc	A	CACALCIUM ION	Q - 33
1uoc_A_17	1uoc	A	CACALCIUM ION	L - 34
1vk3_A_287	1vk3	A	MSESELENOMETHIONINE	V - 287
1vk3_A_287	1vk3	A	MSESELENOMETHIONINE	R - 296
1vk3_A_287	1vk3	A	MSESELENOMETHIONINE	I - 297
1vk3_A_287	1vk3	A	MSESELENOMETHIONINE	L - 298
1vk3_A_287	1vk3	A	MSESELENOMETHIONINE	I - 300
1vk3_A_287	1vk3	A	MSESELENOMETHIONINE	A - 301

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1uoc_A_17	1uoc	A	AC1ENVIRONMENT FOR CA IN CHAIN A	Q - 33

Clusters included in this Subclass

CLUSTER: EH.3.19

CLUSTER: EH.3.25

CLUSTER: EH.3.51

CLUSTER: EH.4.146

CLUSTER: EH.4.36

CLUSTER: EH.4.4

CLUSTER: EH.5.127

CLUSTER: EH.5.143

CLUSTER: EH.5.153

CLUSTER: EH.5.3

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