Logo
Information on SUBCLASS 1.1.16
Subclass Accession number: 952
Subclass: 1.1.16 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 9.4 +/- 11.8
Average RMSD (Å) : 0.543 +/- 0.143

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XhXXp
(φψ)-conformation: bbpaa
Pattern: xxx[fgiltv][dehknpqrst]x[adegkq][cdehnqrsy]xxx[fiklmtv]
Conservation:-1.000-0.135-1.0332.1230.341-0.7001.484-0.585-0.080-0.545-0.9720.103
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3q_A_1361a3q   A138149VLHVTKKNMMGTEEE--TTTHHHHbxxxxaaaaaaa
1b7g_O_501b7g   O5060.IYVPQQSIKKF.EE--GGGHHHH.bbbpaaaaaaa
1eje_A_781eje   A8192INITPADIIERMEEE-BGGGHHHHxbxbxaaaaaaa
1gpj_A_2141gpj   A214224.EAVRFDELVDH.EE--GGGHHHH.bxbxaaaaaaa
1gx5_A_4501gx5   A451462CYSIEPLDLPQIEEEE-GGGHHHHbxbbxaaaaaaa
1gyx_A_401gyx   A4354LQQIQPESWQAIEEE--GGGHHHHbbxbxaaaaaaa
1h2k_A_2141h2k   A216227CILFPPDQFECLEEEE-GGGHHHHbbbbxaaaaaaa
1iuj_A_21iuj   A718RIPVRPEYAEQFEE-B-GGGHHHHxbwxxaaaaaaa
1jax_A_671jax   A6980VLTIPWEHAIDTEE-S-GGGHHHHbxabxaaaaaaa
1jih_A_2831jih   A283294QTIVKNDCLLDFEEE--GGGHHHHbbbbpaaaaaaa
1jj2_O_211jj2   O2131.VWFNPERQGDI.EEE-GGGHHHH.xbbpaaaaaaa
1jql_B_21jql   B212.IRLYPEQLRAQ.EE--GGGHHHH.xbbpaaaaaaa
1l8a_A_1361l8a   A136147LVYFQGHISPGVEEE--GGGHHHHxxxxpaaaaaaa
1o20_A_1421o20   A143154LLRGGSDALNSNEEE--GGGHHHHbbbxxaaaaaaa
1oe8_A_321oe8   A3344DERISFQDWPKIEEE--TTTHHHHxbxxxaaaaaaa
1on3_A_4891on3   A489499.DVIDPADTRRK.EE--GGGHHHH.bbbxaaaaaaa
1or4_A_251or4   A2535.IQLTNKHADVK.EE--GGGHHHH.bbbxaaaaaaa
1r3e_A_2401r3e   A240251RVVVHQESTKMIEEE--TTTHHHHxbbbxaaaaaaa
1set_A_4021set   A402412.VRVPQALIPYM.EE--GGGHHHH.bxbwaaaaaaa
1usc_A_691usc   A7283ASFHPFGQKDLVEEE-BGGGHHHHbbbbxaaaaaaa
2gsq_*_292gsq   -3041DRVVEMADWPNLEEE--TTTHHHHbxxbxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eje_A_781eje   A     FMNFLAVIN MONONUCLEOTIDE M - 92
1eje_A_781eje   A     FMNFLAVIN MONONUCLEOTIDE W - 93
1gx5_A_4501gx5   A     MSESELENOMETHIONINE I - 463
1gx5_A_4501gx5   A     MSESELENOMETHIONINE L - 466
1gx5_A_4501gx5   A     MSESELENOMETHIONINE H - 467
1gyx_A_401gyx   A     BEZBENZOIC ACID W - 51
1h2k_A_2141h2k   A     OGAN-OXALYOLGLYCINE K - 214
1iuj_A_21iuj   A     ZNZINC ION N - 6
1iuj_A_21iuj   A     ZNZINC ION F - 22
1iuj_A_21iuj   A     ZNZINC ION R - 25
1l8a_A_1361l8a   A     TDPTHIAMIN DIPHOSPHATE Q - 140
1l8a_A_1361l8a   A     TDPTHIAMIN DIPHOSPHATE H - 142
1l8a_A_1361l8a   A     TDPTHIAMIN DIPHOSPHATE I - 143
1o20_A_1421o20   A     MSESELENOMETHIONINE L - 143
1o20_A_1421o20   A     MSESELENOMETHIONINE L - 144
1o20_A_1421o20   A     MSESELENOMETHIONINE R - 145
1o20_A_1421o20   A     MSESELENOMETHIONINE I - 157
1oe8_A_321oe8   A     GSHGLUTHATHIONE W - 41
1usc_A_691usc   A     FMNFLAVIN MONONUCLEOTIDE V - 83
1usc_A_691usc   A     FMNFLAVIN MONONUCLEOTIDE H - 84
1usc_A_691usc   A     FMNFLAVIN MONONUCLEOTIDE W - 85
1usc_A_691usc   A     FMNFLAVIN MONONUCLEOTIDE L - 86
2gsq_*_292gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE M - 35
2gsq_*_292gsq   *     GBIS-(3-IODOBENZYL)GLUTATHIONE W - 38
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gyx_A_401gyx   A AC2BEZ BINDING SITE FOR CHAIN AW - 51
1oe8_A_321oe8   A AC1GSH BINDING SITE FOR CHAIN AW - 41

Clusters included in this Subclass
CLUSTER: EH.4.114
CLUSTER: EH.4.41
CLUSTER: EH.5.257
CLUSTER: EH.5.36
CLUSTER: EH.5.74
CLUSTER: EH.6.12
CLUSTER: EH.6.127