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Information on SUBCLASS 1.1.18
Subclass Accession number: 954
Subclass: 1.1.18 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 8.7 +/- 13.4
Average RMSD (Å) : 0.445 +/- 0.136

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXXXX
(φψ)-conformation: bbpaa
Pattern: x[afgilvw][acdgnstv]xx[degkqrst]x[agilmvwy]
Conservation:-0.4111.1321.636-1.586-0.3830.0620.007-0.458
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6q_*_2311a6q   -235242ILACDGIWEEE-HHHHbbbxaaaa
1amf_*_311amf   -3542SFASSSTLEEE-HHHHbbbxaaaa
1bs0_A_2431bs0   A245252VLCSSTVAEEE-HHHHbbbxaaaa
1cnz_A_2421cnz   A243250LLCSNLFGEEE-HHHHxbbxaaaa
1ef8_A_1801ef8   A180187HVVEVEELEEE-HHHHbbbxaaaa
1eu8_A_2511eu8   A254261ERNWPYAWEEE-THHHbbbxaaaa
1fc4_A_2521fc4   A254261TAARKEVVEEE-HHHHbbbxaaaa
1fg7_A_2241fg7   A226233TLANEEVIEEE-HHHHbbbxaaaa
1g5h_A_2041g5h   A215222WFTPTRTSEEE-HHHHbbbxaaaa
1g8m_A_311g8m   A3239LIASGGTAEEE-HHHHxbbxaaaa
1itw_A_5391itw   A540547SVTGNVLREEE-HHHHxbbxaaaa
1kl1_A_2341kl1   A236243ILCQEQFAEEE-HHHHbbbxaaaa
1m1n_A_4201m1n   A421428IGSGIKEKEEE-HHHHbbbbaaaa
1mdw_A_741mdw   A7481EWKRPTEIEEE-HHHHbxbxaaaa
1o7n_B_5841o7n   B588595YNENFQQLEEE-HHHHbbbxaaaa
1pfk_A_961pfk   A99106VIGGDGSYEEE-HHHHbbbxaaaa
1qzz_A_2081qzz   A211218LVELAGPAEEE-HHHHbbbxaaaa
1rjd_A_1221rjd   A126133DIDYNESVEEE-HHHHxbbpaaaa
1sml_A_1031sml   A104111VAANAESAEEE-HHHHbbbxaaaa
2oat_A_3022oat   A304311VLCDDDIMEEE-HHHHbbbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a6q_*_2311a6q   *     MNMANGANESE (II) ION C - 238
1a6q_*_2311a6q   *     MNMANGANESE (II) ION D - 239
1a6q_*_2311a6q   *     PO4PHOSPHATE ION D - 239
1a6q_*_2311a6q   *     MNMANGANESE (II) ION G - 240
1amf_*_311amf   *     MOOMOLYBDATE ION A - 37
1amf_*_311amf   *     MOOMOLYBDATE ION S - 38
1amf_*_311amf   *     MOOMOLYBDATE ION S - 39
1amf_*_311amf   *     MOOMOLYBDATE ION S - 40
1cnz_A_2421cnz   A     MNMANGANESE (II) ION D - 251
1cnz_A_2421cnz   A     MNMANGANESE (II) ION I - 252
1cnz_A_2421cnz   A     MNMANGANESE (II) ION D - 255
1eu8_A_2511eu8   A     TRETREHALOSE W - 257
1eu8_A_2511eu8   A     TRETREHALOSE Y - 259
1fc4_A_2521fc4   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 252
1fc4_A_2521fc4   A     MSESELENOMETHIONINE A - 255
1fc4_A_2521fc4   A     MSESELENOMETHIONINE A - 256
1fc4_A_2521fc4   A     MSESELENOMETHIONINE R - 257
1fg7_A_2241fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE G - 224
1fg7_A_2241fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE F - 225
1fg7_A_2241fg7   A     MSESELENOMETHIONINE V - 232
1fg7_A_2241fg7   A     MSESELENOMETHIONINE I - 233
1fg7_A_2241fg7   A     MSESELENOMETHIONINE N - 234
1fg7_A_2241fg7   A     MSESELENOMETHIONINE L - 235
1g5h_A_2041g5h   A     MSESELENOMETHIONINE L - 213
1g5h_A_2041g5h   A     MSESELENOMETHIONINE W - 229
1g5h_A_2041g5h   A     MSESELENOMETHIONINE H - 232
1g5h_A_2041g5h   A     MSESELENOMETHIONINE R - 233
1g5h_A_2041g5h   A     MSESELENOMETHIONINE W - 236
1g5h_A_2041g5h   A     MSESELENOMETHIONINE R - 238
1g8m_A_311g8m   A     GGUANOSINE-5'-MONOPHOSPHATE A - 34
1g8m_A_311g8m   A     GGUANOSINE-5'-MONOPHOSPHATE S - 35
1g8m_A_311g8m   A     GGUANOSINE-5'-MONOPHOSPHATE G - 36
1g8m_A_311g8m   A     GGUANOSINE-5'-MONOPHOSPHATE G - 37
1g8m_A_311g8m   A     GGUANOSINE-5'-MONOPHOSPHATE T - 38
1g8m_A_311g8m   A     GGUANOSINE-5'-MONOPHOSPHATE A - 39
1itw_A_5391itw   A     ICIISOCITRIC ACID N - 544
1itw_A_5391itw   A     MNMANGANESE (II) ION R - 547
1itw_A_5391itw   A     ICIISOCITRIC ACID R - 547
1itw_A_5391itw   A     MNMANGANESE (II) ION D - 548
1itw_A_5391itw   A     ICIISOCITRIC ACID D - 548
1itw_A_5391itw   A     MNMANGANESE (II) ION Y - 549
1itw_A_5391itw   A     MNMANGANESE (II) ION T - 551
1itw_A_5391itw   A     ICIISOCITRIC ACID T - 551
1itw_A_5391itw   A     MNMANGANESE (II) ION D - 552
1m1n_A_4201m1n   A     CACALCIUM ION S - 423
1m1n_A_4201m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID S - 423
1m1n_A_4201m1n   A     CACALCIUM ION G - 424
1m1n_A_4201m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID G - 424
1m1n_A_4201m1n   A     CACALCIUM ION I - 425
1m1n_A_4201m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID I - 425
1m1n_A_4201m1n   A     CACALCIUM ION K - 426
1m1n_A_4201m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID K - 426
1m1n_A_4201m1n   A     CACALCIUM ION E - 427
1m1n_A_4201m1n   A     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID E - 427
1m1n_A_4201m1n   A     CACALCIUM ION F - 429
1m1n_A_4201m1n   A     CACALCIUM ION Q - 432
1m1n_A_4201m1n   A     CACALCIUM ION K - 433
1o7n_B_5841o7n   B     EDO1,2-ETHANEDIOL A - 584
1o7n_B_5841o7n   B     EDO1,2-ETHANEDIOL M - 585
1o7n_B_5841o7n   B     EDO1,2-ETHANEDIOL N - 586
1o7n_B_5841o7n   B     EDO1,2-ETHANEDIOL Y - 588
1o7n_B_5841o7n   B     EDO1,2-ETHANEDIOL R - 598
1o7n_B_5841o7n   B     EDO1,2-ETHANEDIOL Q - 602
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 101
1pfk_A_961pfk   A     FBPFRUCTOSE-1,6-DIPHOSPHATE G - 102
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 102
1pfk_A_961pfk   A     MGMAGNESIUM ION G - 102
1pfk_A_961pfk   A     FBPFRUCTOSE-1,6-DIPHOSPHATE D - 103
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE D - 103
1pfk_A_961pfk   A     MGMAGNESIUM ION D - 103
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 104
1pfk_A_961pfk   A     MGMAGNESIUM ION G - 104
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE S - 105
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE Y - 106
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE M - 107
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE G - 108
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE A - 109
1pfk_A_961pfk   A     ADPADENOSINE-5'-DIPHOSPHATE R - 111
1qzz_A_2081qzz   A     ACTACETATE ION L - 211
1qzz_A_2081qzz   A     SAMS-ADENOSYLMETHIONINE V - 212
1qzz_A_2081qzz   A     SAMS-ADENOSYLMETHIONINE E - 213
1qzz_A_2081qzz   A     SAMS-ADENOSYLMETHIONINE L - 214
1qzz_A_2081qzz   A     SAMS-ADENOSYLMETHIONINE P - 217
1qzz_A_2081qzz   A     ACTACETATE ION F - 225
1rjd_A_1221rjd   A     SAMS-ADENOSYLMETHIONINE I - 127
1rjd_A_1221rjd   A     SAMS-ADENOSYLMETHIONINE D - 128
1rjd_A_1221rjd   A     SAMS-ADENOSYLMETHIONINE Y - 129
1rjd_A_1221rjd   A     SAMS-ADENOSYLMETHIONINE S - 132
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1a6q_*_2311a6q   * MN2MN 2+ BINDING SITES.D - 239
1amf_*_311amf   * MO4MOLYBDATE BINDING SITE.S - 39
1o7n_B_5841o7n   B AC2EDO BINDING SITE FOR CHAIN BY - 588
1o7n_B_5841o7n   B AC2EDO BINDING SITE FOR CHAIN BQ - 602

Clusters included in this Subclass
CLUSTER: EH.0.29
CLUSTER: EH.1.21
CLUSTER: EH.2.35