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Information on SUBCLASS 1.1.36
Subclass Accession number: 972
Subclass: 1.1.36 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  
GO : GO:0046914 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 6.7 +/- 10.3
Average RMSD (Å) : 0.525 +/- 0.171

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: XhXhX
(φψ)-conformation: bbpaa
Pattern: xx[FIL]x[GWY]x[NPR][ILVY]xx
Conservation:-0.642-0.8411.120-0.4682.080-0.7090.3900.553-0.841-0.642
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1az9_*_1611az9   -161170TMIDWRPVVHEEE--HHHHHbbbxaaaaaa
1dkr_A_1471dkr   A148157DHLMGVPILGEEE-SHHHHHbxxbaaaaaa
1m0l_A_741m0l   A7685NPIYWARYADEEE-THHHHHxwbxaaaaaa
1q16_B_1041q16   B104113FDFDYQNLHTEEE-THHHHHbbbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL W - 80
1m0l_A_741m0l   A     RETRETINAL Y - 83
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL A - 84
1m0l_A_741m0l   A     RETRETINAL D - 85
1m0l_A_741m0l   A     RETRETINAL W - 86
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL L - 87
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL F - 88
1m0l_A_741m0l   A     RETRETINAL T - 89
1m0l_A_741m0l   A     RETRETINAL T - 90
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL P - 91
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL L - 92
1m0l_A_741m0l   A     RETRETINAL L - 93
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL L - 95

Clusters included in this Subclass
CLUSTER: EH.2.51
CLUSTER: EH.3.134