ArchDB - Biological DataBase of Protein Loops

Information on 1bd0_A_39

Loop code: 1bd0_A_39
PDB: 1bd0
Chain: A
Type: HH alpha-alpha

Loop Start: 39 Loop Length: 3
Sec Struct Nt length: 5 Sec Struct Ct length: 11
Structure geometry

d (Å): 7.702600

delta (°): 95.227798

theta (°): 85.503197

rho (°): 9.933100

Sequence:	KANAYGHGDVQVARTALEA
Sec Struct:	HHHHHTT-HHHHHHHHHHH

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
IN5{1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL-PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID	K - 39	1	0
IN5{1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL-PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID	Y - 43	0	1

PDB Site Annotation

Site	Residue	atSS	atLOOP
CIC - LYS 39 AND TYR 265 (FROM THE OTHER SUBUNIT) ARE PROPOSED CATALYTIC RESIDUES IN THE ACTIVE	K - 39	1	0