Information on 3tmk_A_7 |
Loop code: 3tmk_A_7 PDB: 3tmk Chain: A Type: EH beta-alpha |
Loop Start: 7 Loop Length: 5 Sec Struct Nt length: 6 Sec Struct Ct length: 12 Structure geometry
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Sequence: | LILIEGLDRTGKTTQCNILYKKL |
Sec Struct: | EEEEEE-SSSSHHHHHHHHHHHH |
PDB ligands within a cut-off distance of 6 Å in this loop |
Ligands | Residue | atSS | atLOOP |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | G - 12 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | L - 13 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | D - 14 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | R - 15 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | T - 16 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | G - 17 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | K - 18 | 0 | 1 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | T - 19 | 1 | 0 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | T - 20 | 1 | 0 |
T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | Q - 21 | 1 | 0 |
Bibliographic Annotations |
Annotation | Residue | atSS | atLOOP |
REFERENCEA.LAVIE,M.KONRAD,R.BRUNDIERS,R.S.GOODY,I.SCHLICHTING,J.REINSTEIN. CRYSTAL STRUCTURE OF YEAST THYMIDYLATE KINASE COMPLEXED WITH THE BISUBSTRATE INHIBITOR P1-(5'-ADENOSYL) P5-(5'-THYMIDYL) PENTAPHOSPHATE (TP5A) AT 2.0 A RESOLUTION: IMPLICATIONS FOR CATALYSIS AND AZT ACTIVATION BIOCHEMISTRY v.37;3677,1998 | |||
CATALYTIC RESIDUE | R - 15 | 0 | 1 |
Mg ION BINDING RESIDUE | T - 16 | 0 | 1 |
ADENINE BINDING RESIDUE | Q - 21 | 1 | 0 |
Associated ArchDB-KI Subclass to 3tmk_A_7 |