PDB: 1ahs Compound: african horse sickness virus (serotype 4) vp7 Classification: COAT PROTEIN (VIRAL) Entry date in PDB: 1996-11-08 Resolution [Å]: 2.30 R-Factor: 0.213

CHAIN: A SWISS-PROT/TREMBL: P36325    KEYWORD: 3D-structure    Core protein    Glycoprotein    SCOP: b.19.1.1 All beta proteins    Viral protein domain    Viral protein domain    Top domain of virus capsid protein    RDV p8, central (top) domain    African horse sickness virus GO:  viral capsid    structural molecule activity    CHAIN: B SWISS-PROT/TREMBL: P36325    KEYWORD: 3D-structure    Core protein    Glycoprotein    SCOP: b.19.1.1 All beta proteins    Viral protein domain    Viral protein domain    Top domain of virus capsid protein    RDV p8, central (top) domain    African horse sickness virus GO:  viral capsid    structural molecule activity    CHAIN: C SWISS-PROT/TREMBL: P36325    KEYWORD: 3D-structure    Core protein    Glycoprotein    SCOP: b.19.1.1 All beta proteins    Viral protein domain    Viral protein domain    Top domain of virus capsid protein    RDV p8, central (top) domain    African horse sickness virus GO:  viral capsid    structural molecule activity

Image Source: PDB

Loops in ArchDB40 clusters

1ahs_A_148 - HA => SUBCLASS : 2.2.1
1ahs_A_194 - HA => SUBCLASS : 3.1.1
1ahs_A_194 - HA => SUBCLASS : 5.3.1
1ahs_A_166 - EH => SUBCLASS : 0.1.53
1ahs_A_184 - AR => SUBCLASS : 1.1.12
1ahs_A_157 - AR => SUBCLASS : 3.5.2
1ahs_A_231 - AR => SUBCLASS : 3.8.1
1ahs_A_215 - AR => SUBCLASS : 4.1.2
1ahs_A_223 - AR => SUBCLASS : 4.43.1

Loops in ArchDB95 clusters

1ahs_A_157 - AR => SUBCLASS : 1.1.2
1ahs_A_184 - AR => SUBCLASS : 1.2.13
1ahs_A_215 - AR => SUBCLASS : 2.3.1
1ahs_A_215 - AR => SUBCLASS : 3.3.1
1ahs_A_231 - AR => SUBCLASS : 3.9.1
1ahs_A_215 - AR => SUBCLASS : 4.9.1
1ahs_A_223 - AR => SUBCLASS : 4.46.1
1ahs_A_231 - AR => SUBCLASS : 5.1.1
1ahs_A_148 - HA => SUBCLASS : 2.2.1
1ahs_A_194 - HA => SUBCLASS : 3.1.1
1ahs_A_194 - HA => SUBCLASS : 4.3.2

Loops not clustered in ArchDB

1ahs_A_201 - AR
1ahs_A_209 - HA
1ahs_A_171 - HE

1ahs A - percentage of sequence identity: 100
1ahs B - percentage of sequence identity: 100
1ahs C - percentage of sequence identity: 100