PDB: 1avq Compound: lambda exonuclease Classification: DEOXYRIBONUCLEASE Entry date in PDB: 1998-03-18 Resolution [Å]: 2.40 R-Factor: 0.198

CHAIN: A SWISS-PROT/TREMBL: P03697    KEYWORD: 3D-structure    Exonuclease    Hydrolase    Magnesium    Nuclease    EC: 3.1.11.3 SCOP: c.52.1.13 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    lambda exonuclease    lambda exonuclease    Bacteriophage lambda GO:   CHAIN: B SWISS-PROT/TREMBL: P03697    KEYWORD: 3D-structure    Exonuclease    Hydrolase    Magnesium    Nuclease    EC: 3.1.11.3 SCOP: c.52.1.13 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    lambda exonuclease    lambda exonuclease    Bacteriophage lambda GO:   CHAIN: C SWISS-PROT/TREMBL: P03697    KEYWORD: 3D-structure    Exonuclease    Hydrolase    Magnesium    Nuclease    EC: 3.1.11.3 SCOP: c.52.1.13 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    lambda exonuclease    lambda exonuclease    Bacteriophage lambda GO:

Image Source: PDB

Loops in ArchDB40 clusters

1avq_A_75 - HE => SUBCLASS : 1.1.2
1avq_A_152 - HE => SUBCLASS : 3.1.2
1avq_A_152 - HE => SUBCLASS : 3.1.3
1avq_A_75 - HE => SUBCLASS : 3.10.1
1avq_A_22 - HE => SUBCLASS : 3.16.1
1avq_A_120 - HA => SUBCLASS : 3.1.1
1avq_A_120 - HA => SUBCLASS : 4.2.1
1avq_A_184 - EH => SUBCLASS : 1.1.22
1avq_A_184 - EH => SUBCLASS : 2.2.4

Loops in ArchDB95 clusters

1avq_A_184 - EH => SUBCLASS : 0.1.41
1avq_A_184 - EH => SUBCLASS : 2.4.15
1avq_A_127 - EH => SUBCLASS : 3.3.2
1avq_A_152 - HE => SUBCLASS : 3.1.1
1avq_A_75 - HE => SUBCLASS : 3.2.1
1avq_A_75 - HE => SUBCLASS : 3.2.2
1avq_A_75 - HE => SUBCLASS : 3.2.11
1avq_A_152 - HE => SUBCLASS : 3.3.1
1avq_A_152 - HE => SUBCLASS : 3.9.1
1avq_A_22 - HE => SUBCLASS : 3.13.3
1avq_A_120 - HA => SUBCLASS : 3.1.1
1avq_A_120 - HA => SUBCLASS : 3.1.2

Loops in ArchDB-EC clusters

1avq_A_22 - HE => SUBCLASS : 3.9.1

Loops not clustered in ArchDB

1avq_A_114 - AR
1avq_A_114 - AR
1avq_A_100 - AR
1avq_A_100 - AR
1avq_A_32 - EH
1avq_A_106 - HA
1avq_A_169 - HA
1avq_A_106 - HA
1avq_A_120 - HA
1avq_A_169 - HA
1avq_A_136 - HH
1avq_A_52 - HH
1avq_A_3 - HH

1avq A - percentage of sequence identity: 100
1avq B - percentage of sequence identity: 100
1avq C - percentage of sequence identity: 100