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Information on 1awc
PDB: 1awc
Compound: ga binding protein alpha
Classification: COMPLEX (TRANSCRIPTION REGULATION/DNA)
Entry date in PDB: 1998-03-18
Resolution [Å]: 2.15
R-Factor: 0.211


CHAIN: A
SWISS-PROT/TREMBL: Q00422
   KEYWORD: 3D-structure    DNA-binding    Nuclear protein    Transcription regulation   
SCOP: a.4.5.21 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    ets domain    GA binding protein (GABP) alpha    Mouse (Mus musculus)
GO:  nucleus    DNA binding    transcription factor activity    regulation of transcription, DNA-dependent   


CHAIN: B
SWISS-PROT/TREMBL: Q00420
   KEYWORD: 3D-structure    Alternative splicing    ANK repeat    Nuclear protein    Repeat    Transcription regulation   
SCOP: d.211.1.1 Alpha and beta proteins (a+b)    beta-hairpin-alpha-hairpin repeat    Ankyrin repeat    Ankyrin repeat    GA bindinig protein (GABP) beta 1    Mouse (Mus musculus)
GO:  
1awc Image
Image Source: PDB

Stored Loops of 1awc

Loops in ArchDB40 clusters

1awc_B_6 - HH => SUBCLASS : 2.2.1
1awc_B_41 - HH => SUBCLASS : 2.2.1
1awc_B_140 - HH => SUBCLASS : 2.2.1
1awc_B_74 - HH => SUBCLASS : 2.2.1
1awc_B_107 - HH => SUBCLASS : 2.2.1
1awc_B_140 - HH => SUBCLASS : 2.2.4
1awc_B_117 - HH => SUBCLASS : 13.1.1
1awc_B_51 - HH => SUBCLASS : 13.1.1
1awc_B_84 - HH => SUBCLASS : 13.1.1

Loops in ArchDB95 clusters

1awc_A_347 - EH => SUBCLASS : 3.3.3
1awc_B_6 - HH => SUBCLASS : 2.2.1
1awc_B_41 - HH => SUBCLASS : 2.2.1
1awc_B_140 - HH => SUBCLASS : 2.2.1
1awc_B_74 - HH => SUBCLASS : 2.2.1
1awc_B_107 - HH => SUBCLASS : 2.2.1
1awc_B_140 - HH => SUBCLASS : 2.2.3
1awc_B_140 - HH => SUBCLASS : 2.2.15
1awc_A_353 - HH => SUBCLASS : 6.16.1
1awc_B_117 - HH => SUBCLASS : 13.1.1
1awc_B_51 - HH => SUBCLASS : 13.1.1
1awc_B_84 - HH => SUBCLASS : 13.1.1
1awc_A_371 - HE => SUBCLASS : 3.6.7
1awc_A_322 - HE => SUBCLASS : 7.12.1
1awc_A_387 - HA => SUBCLASS : 6.8.2

Loops not clustered in ArchDB

1awc_A_396 - EH
1awc_A_340 - HA
1awc_B_19 - HH
1awc_A_403 - HH

Homologous structures to 1awc classified in ArchDB

1bc8 C - percentage of sequence identity: 64
1dux C - percentage of sequence identity: 60
1gvj A - percentage of sequence identity: 64
1k79 A - percentage of sequence identity: 64
1mj0 A - percentage of sequence identity: 66
1svx A - percentage of sequence identity: 66
2bkk B - percentage of sequence identity: 66
2bkk D - percentage of sequence identity: 66