PDB: 1b24 Compound: i-dmoi Classification: INTRON-ENCODED Entry date in PDB: 1999-03-24 Resolution [Å]: 2.20 R-Factor: 0.218

CHAIN: A SWISS-PROT/TREMBL: P21505    KEYWORD: 3D-structure    Endonuclease    Hydrolase    Intron homing    Magnesium    Nuclease    EC: 3.1.-.- SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-dmoI    Archaeon Desulfurococcus mobilis SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-dmoI    Archaeon Desulfurococcus mobilis GO:  endonuclease activity    intein-mediated protein splicing

Image Source: PDB

Loops in ArchDB40 clusters

1b24_A_132 - HE => SUBCLASS : 2.1.1
1b24_A_70 - HA => SUBCLASS : 2.6.1
1b24_A_70 - HA => SUBCLASS : 3.7.1
1b24_A_149 - HA => SUBCLASS : 4.1.2
1b24_A_78 - EH => SUBCLASS : 0.1.18
1b24_A_78 - EH => SUBCLASS : 1.1.2
1b24_A_160 - EH => SUBCLASS : 1.1.5
1b24_A_126 - EH => SUBCLASS : 2.1.1
1b24_A_34 - EH => SUBCLASS : 2.1.1
1b24_A_34 - EH => SUBCLASS : 2.1.13
1b24_A_34 - EH => SUBCLASS : 2.1.17

Loops in ArchDB95 clusters

1b24_A_78 - EH => SUBCLASS : 0.1.11
1b24_A_160 - EH => SUBCLASS : 1.1.12
1b24_A_160 - EH => SUBCLASS : 1.1.22
1b24_A_126 - EH => SUBCLASS : 2.1.1
1b24_A_34 - EH => SUBCLASS : 2.1.2
1b24_A_126 - EH => SUBCLASS : 2.1.2
1b24_A_132 - HE => SUBCLASS : 2.1.1
1b24_A_58 - HE => SUBCLASS : 6.26.1
1b24_A_70 - HA => SUBCLASS : 2.8.3
1b24_A_149 - HA => SUBCLASS : 4.1.2
1b24_A_70 - HA => SUBCLASS : 5.3.1

Loops in ArchDB-EC clusters

1b24_A_132 - HE => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1b24_A_22 - HA
1b24_A_22 - HA
1b24_A_70 - HA
1b24_A_149 - HA
1b24_A_8 - HE
1b24_A_105 - HE
1b24_A_45 - HH
1b24_A_85 - HH

1mow D - percentage of sequence identity: 86
1mow G - percentage of sequence identity: 86
1mow J - percentage of sequence identity: 86