PDB: 1b77 Compound: sliding clamp Classification: SLIDING CLAMP Entry date in PDB: 1999-02-02 Resolution [Å]: 2.10 R-Factor: 0.225

CHAIN: A SWISS-PROT/TREMBL: O80164    KEYWORD: 3D-structure    DNA replication    SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    gp45 sliding clamp    Bacteriophage RB69 SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    gp45 sliding clamp    Bacteriophage RB69 GO:  DNA replication    CHAIN: B SWISS-PROT/TREMBL: O80164    KEYWORD: 3D-structure    DNA replication    SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    gp45 sliding clamp    Bacteriophage RB69 SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    gp45 sliding clamp    Bacteriophage RB69 GO:  DNA replication    CHAIN: C SWISS-PROT/TREMBL: O80164    KEYWORD: 3D-structure    DNA replication    SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    gp45 sliding clamp    Bacteriophage RB69 SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    gp45 sliding clamp    Bacteriophage RB69 GO:  DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1b77_A_120 - HE => SUBCLASS : 3.1.1
1b77_A_57 - HE => SUBCLASS : 5.1.3
1b77_A_57 - HE => SUBCLASS : 5.11.1
1b77_A_204 - HA => SUBCLASS : 2.2.1
1b77_A_81 - HA => SUBCLASS : 2.2.1
1b77_A_194 - HA => SUBCLASS : 2.3.1
1b77_A_72 - HA => SUBCLASS : 3.1.1
1b77_A_26 - HA => SUBCLASS : 5.2.1
1b77_A_114 - EH => SUBCLASS : 1.1.3
1b77_A_114 - EH => SUBCLASS : 1.1.8
1b77_A_215 - AR => SUBCLASS : 5.5.1

Loops in ArchDB95 clusters

1b77_A_114 - EH => SUBCLASS : 1.1.7
1b77_A_52 - EH => SUBCLASS : 2.1.18
1b77_A_215 - AR => SUBCLASS : 4.6.1
1b77_A_38 - AR => SUBCLASS : 4.50.1
1b77_A_120 - HE => SUBCLASS : 3.1.1
1b77_A_57 - HE => SUBCLASS : 5.1.1
1b77_A_81 - HA => SUBCLASS : 2.2.1
1b77_A_204 - HA => SUBCLASS : 2.2.1
1b77_A_194 - HA => SUBCLASS : 2.3.1
1b77_A_81 - HA => SUBCLASS : 3.1.1
1b77_A_72 - HA => SUBCLASS : 3.1.1
1b77_A_26 - HA => SUBCLASS : 5.2.1

Loops not clustered in ArchDB

1b77_A_21 - AR
1b77_A_89 - AR
1b77_A_165 - AR
1b77_A_178 - AR
1b77_A_137 - HA
1b77_A_146 - HA
1b77_A_5 - HE

1b77 A - percentage of sequence identity: 100
1b77 B - percentage of sequence identity: 100
1b77 C - percentage of sequence identity: 100
1b8h A - percentage of sequence identity: 100
1b8h B - percentage of sequence identity: 100
1b8h C - percentage of sequence identity: 100
1czd A - percentage of sequence identity: 78
1czd B - percentage of sequence identity: 78
1czd C - percentage of sequence identity: 78