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Information on 1bu6
PDB: 1bu6
Compound: glycerol kinase
Classification: TRANSFERASE
Entry date in PDB: 1998-09-16
Resolution [Å]: 2.37
R-Factor: 0.167


CHAIN: O
SWISS-PROT/TREMBL: P08859
   KEYWORD: 3D-structure    ATP-binding    Complete proteome    Glycerol metabolism    Kinase    Metal-binding    Transferase    Zinc   
EC: 2.7.1.30
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
GO:  glycerol kinase activity    carbohydrate metabolism    glycerol-3-phosphate metabolism   


CHAIN: X
SWISS-PROT/TREMBL: P08859
   KEYWORD: 3D-structure    ATP-binding    Complete proteome    Glycerol metabolism    Kinase    Metal-binding    Transferase    Zinc   
EC: 2.7.1.30
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
GO:  glycerol kinase activity    carbohydrate metabolism    glycerol-3-phosphate metabolism   


CHAIN: Y
SWISS-PROT/TREMBL: P08859
   KEYWORD: 3D-structure    ATP-binding    Complete proteome    Glycerol metabolism    Kinase    Metal-binding    Transferase    Zinc   
EC: 2.7.1.30
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
GO:  glycerol kinase activity    carbohydrate metabolism    glycerol-3-phosphate metabolism   


CHAIN: Z
SWISS-PROT/TREMBL: P08859
   KEYWORD: 3D-structure    ATP-binding    Complete proteome    Glycerol metabolism    Kinase    Metal-binding    Transferase    Zinc   
EC: 2.7.1.30
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
SCOP: c.55.1.4 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Glycerol kinase    Glycerol kinase    Escherichia coli
GO:  glycerol kinase activity    carbohydrate metabolism    glycerol-3-phosphate metabolism   
1bu6 Image
Image Source: PDB

Stored Loops of 1bu6

Loops in ArchDB40 clusters

1bu6_O_416 - HE => SUBCLASS : 1.1.4
1bu6_O_416 - HE => SUBCLASS : 1.1.5
1bu6_O_151 - HE => SUBCLASS : 2.4.1
1bu6_O_183 - HE => SUBCLASS : 2.4.1
1bu6_O_165 - HE => SUBCLASS : 4.17.1
1bu6_O_373 - HE => SUBCLASS : 5.6.1
1bu6_O_49 - HE => SUBCLASS : 6.1.1
1bu6_O_49 - HE => SUBCLASS : 6.2.1
1bu6_O_5 - HA => SUBCLASS : 2.2.3
1bu6_O_260 - HA => SUBCLASS : 2.8.1
1bu6_O_192 - HA => SUBCLASS : 4.1.1
1bu6_O_86 - HA => SUBCLASS : 4.1.2
1bu6_O_15 - HA => SUBCLASS : 4.2.2
1bu6_O_287 - HA => SUBCLASS : 5.1.5
1bu6_O_46 - EH => SUBCLASS : 1.1.1
1bu6_O_180 - EH => SUBCLASS : 1.1.1
1bu6_O_198 - EH => SUBCLASS : 1.1.9
1bu6_O_198 - EH => SUBCLASS : 1.1.15
1bu6_O_363 - EH => SUBCLASS : 5.1.5
1bu6_O_137 - HH => SUBCLASS : 1.1.42
1bu6_O_109 - HH => SUBCLASS : 1.3.3
1bu6_O_438 - HH => SUBCLASS : 5.5.1

Loops in ArchDB95 clusters

1bu6_O_180 - EH => SUBCLASS : 1.1.2
1bu6_O_198 - EH => SUBCLASS : 1.1.7
1bu6_O_46 - EH => SUBCLASS : 1.1.25
1bu6_O_363 - EH => SUBCLASS : 6.2.1
1bu6_O_405 - EH => SUBCLASS : 6.22.1
1bu6_O_109 - HH => SUBCLASS : 1.3.2
1bu6_O_438 - HH => SUBCLASS : 5.6.3
1bu6_O_416 - HE => SUBCLASS : 1.2.2
1bu6_O_416 - HE => SUBCLASS : 1.2.4
1bu6_O_151 - HE => SUBCLASS : 2.4.6
1bu6_O_183 - HE => SUBCLASS : 2.4.11
1bu6_O_151 - HE => SUBCLASS : 2.9.2
1bu6_O_165 - HE => SUBCLASS : 4.23.2
1bu6_O_373 - HE => SUBCLASS : 5.3.4
1bu6_O_373 - HE => SUBCLASS : 5.16.1
1bu6_O_49 - HE => SUBCLASS : 6.1.1
1bu6_O_49 - HE => SUBCLASS : 6.1.3
1bu6_O_201 - HE => SUBCLASS : 6.1.4
1bu6_O_5 - HA => SUBCLASS : 2.2.3
1bu6_O_260 - HA => SUBCLASS : 2.7.1
1bu6_O_15 - HA => SUBCLASS : 3.1.2
1bu6_O_192 - HA => SUBCLASS : 4.1.1
1bu6_O_86 - HA => SUBCLASS : 4.1.2
1bu6_O_287 - HA => SUBCLASS : 5.1.4

Loops in ArchDB-EC clusters

1bu6_O_109 - HH => SUBCLASS : 1.3.2

Loops in ArchDB-KI clusters

1bu6_O_86 - HA => SUBCLASS : 4.1.1
1bu6_O_15 - HA => SUBCLASS : 4.1.1
1bu6_O_192 - HA => SUBCLASS : 4.1.1
1bu6_O_192 - HA => SUBCLASS : 4.3.1

Loops not clustered in ArchDB

1bu6_O_237 - AR
1bu6_O_74 - AR
1bu6_O_216 - AR
1bu6_O_269 - AR
1bu6_O_27 - AR
1bu6_O_74 - AR
1bu6_O_216 - AR
1bu6_O_237 - AR
1bu6_O_269 - AR
1bu6_O_27 - AR
1bu6_O_95 - EH
1bu6_O_429 - EH
1bu6_O_298 - EH
1bu6_O_468 - EH
1bu6_O_243 - EH
1bu6_O_161 - EH
1bu6_O_260 - HA
1bu6_O_287 - HA
1bu6_O_192 - HA
1bu6_O_86 - HA
1bu6_O_221 - HA
1bu6_O_343 - HA
1bu6_O_15 - HA
1bu6_O_5 - HA
1bu6_O_343 - HA
1bu6_O_221 - HA
1bu6_O_245 - HE
1bu6_O_328 - HE
1bu6_O_457 - HE
1bu6_O_121 - HH
1bu6_O_310 - HH

Loops not clustered in ArchDB-KI

1bu6_O_269 - AR
1bu6_O_74 - AR
1bu6_O_216 - AR
1bu6_O_237 - AR
1bu6_O_27 - AR
1bu6_O_46 - EH
1bu6_O_180 - EH
1bu6_O_161 - EH
1bu6_O_298 - EH
1bu6_O_198 - EH
1bu6_O_243 - EH
1bu6_O_429 - EH
1bu6_O_405 - EH
1bu6_O_95 - EH
1bu6_O_468 - EH
1bu6_O_363 - EH
1bu6_O_221 - HA
1bu6_O_343 - HA
1bu6_O_260 - HA
1bu6_O_287 - HA
1bu6_O_5 - HA
1bu6_O_201 - HE
1bu6_O_457 - HE
1bu6_O_373 - HE
1bu6_O_328 - HE
1bu6_O_165 - HE
1bu6_O_49 - HE
1bu6_O_151 - HE
1bu6_O_183 - HE
1bu6_O_245 - HE
1bu6_O_416 - HE
1bu6_O_438 - HH
1bu6_O_310 - HH
1bu6_O_137 - HH
1bu6_O_109 - HH
1bu6_O_121 - HH

Homologous structures to 1bu6 classified in ArchDB

1bo5 O - percentage of sequence identity: 99
1bo5 Z - percentage of sequence identity: 99
1bot O - percentage of sequence identity: 99
1bot Z - percentage of sequence identity: 99
1bu6 O - percentage of sequence identity: 100
1bu6 X - percentage of sequence identity: 100
1bu6 Y - percentage of sequence identity: 100
1bu6 Z - percentage of sequence identity: 100
1bwf O - percentage of sequence identity: 99
1bwf Y - percentage of sequence identity: 99
1gla G - percentage of sequence identity: 99
1glb G - percentage of sequence identity: 99
1glc G - percentage of sequence identity: 99
1gld G - percentage of sequence identity: 99
1gle G - percentage of sequence identity: 99
1glf O - percentage of sequence identity: 99
1glf X - percentage of sequence identity: 99
1glf Y - percentage of sequence identity: 99
1glf Z - percentage of sequence identity: 99
1glj O - percentage of sequence identity: 99
1glj Y - percentage of sequence identity: 99
1gll O - percentage of sequence identity: 99
1gll Y - percentage of sequence identity: 99