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Information on 1c9o
PDB: 1c9o
Compound: cold-shock protein
Classification: TRANSCRIPTION
Entry date in PDB: 2000-04-02
Resolution [Å]: 1.17
R-Factor: 0.125


CHAIN: A
SWISS-PROT/TREMBL: P41016
   KEYWORD: 3D-structure    Activator    DNA-binding    Transcription regulation   
SCOP: b.40.4.5 All beta proteins    OB-fold    Nucleic acid-binding proteins    Cold shock DNA-binding domain-like    Major cold shock protein    Bacillus caldolyticus
GO:  DNA binding    nucleic acid binding    regulation of transcription, DNA-dependent   


CHAIN: B
SWISS-PROT/TREMBL: P41016
   KEYWORD: 3D-structure    Activator    DNA-binding    Transcription regulation   
SCOP: b.40.4.5 All beta proteins    OB-fold    Nucleic acid-binding proteins    Cold shock DNA-binding domain-like    Major cold shock protein    Bacillus caldolyticus
GO:  DNA binding    nucleic acid binding    regulation of transcription, DNA-dependent   
1c9o Image
Image Source: PDB

Stored Loops of 1c9o

Loops in ArchDB40 clusters

1c9o_A_46 - HA => SUBCLASS : 2.2.19
1c9o_A_15 - HA => SUBCLASS : 2.5.7
1c9o_A_2 - HA => SUBCLASS : 4.1.9

Loops in ArchDB95 clusters

1c9o_A_46 - HA => SUBCLASS : 2.2.7
1c9o_A_15 - HA => SUBCLASS : 2.4.7
1c9o_A_15 - HA => SUBCLASS : 2.8.2
1c9o_A_2 - HA => SUBCLASS : 4.1.6

Loops not clustered in ArchDB

1c9o_A_23 - AR

Homologous structures to 1c9o classified in ArchDB

1c9o A - percentage of sequence identity: 100
1c9o B - percentage of sequence identity: 100
1csp - - percentage of sequence identity: 84
1csq - - percentage of sequence identity: 84
1g6p A - percentage of sequence identity: 67
1hz9 A - percentage of sequence identity: 98
1hz9 B - percentage of sequence identity: 98
1hza A - percentage of sequence identity: 98
1hza B - percentage of sequence identity: 98
1hzb A - percentage of sequence identity: 100
1hzb B - percentage of sequence identity: 100
1hzc A - percentage of sequence identity: 96
1hzc B - percentage of sequence identity: 96
1i5f A - percentage of sequence identity: 98
1i5f B - percentage of sequence identity: 98
1mjc - - percentage of sequence identity: 60
1nmf - - percentage of sequence identity: 84
1nmg - - percentage of sequence identity: 84
3mef A - percentage of sequence identity: 60