PDB: 1d4x Compound: c. elegans actin 13 Classification: CONTRACTILE PROTEIN Entry date in PDB: 2001-05-02 Resolution [Å]: 1.75 R-Factor: 0.199

CHAIN: A SWISS-PROT/TREMBL: P10983    KEYWORD: 3D-structure    Acetylation    Multigene family    Structural protein    SCOP: c.55.1.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Actin/HSP70    Actin    Nematode (Caenorhabditis elegans) SCOP: c.55.1.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Actin/HSP70    Actin    Nematode (Caenorhabditis elegans) GO:  actin filament    motor activity    protein binding    structural constituent of cytoskeleton    CHAIN: G SWISS-PROT/TREMBL: P06396    KEYWORD: 3D-structure    Actin capping    Actin-binding    Alternative initiation    Amyloid    Calcium    Cytoskeleton    Disease mutation    Phosphorylation    Repeat    Signal    SCOP: d.109.1.1 Alpha and beta proteins (a+b)    Gelsolin-like    Actin depolymerizing proteins    Gelsolin-like    Gelsolin    Human (Homo sapiens) GO:  actin binding

Image Source: PDB

Loops in ArchDB40 clusters

1d4x_G_16 - HA => SUBCLASS : 2.1.1
1d4x_G_43 - HA => SUBCLASS : 4.2.2
1d4x_G_43 - HA => SUBCLASS : 5.1.4
1d4x_G_57 - EH => SUBCLASS : 5.1.6
1d4x_G_92 - EH => SUBCLASS : 5.19.2
1d4x_G_37 - AR => SUBCLASS : 2.4.3
1d4x_G_37 - AR => SUBCLASS : 3.14.2
1d4x_G_26 - AR => SUBCLASS : 7.5.1

Loops in ArchDB95 clusters

1d4x_A_247 - EH => SUBCLASS : 1.6.1
1d4x_A_176 - EH => SUBCLASS : 2.2.4
1d4x_G_57 - EH => SUBCLASS : 5.1.2
1d4x_G_92 - EH => SUBCLASS : 5.24.2
1d4x_A_65 - AR => SUBCLASS : 2.1.4
1d4x_G_37 - AR => SUBCLASS : 2.2.1
1d4x_A_169 - AR => SUBCLASS : 3.2.1
1d4x_G_26 - AR => SUBCLASS : 7.18.1
1d4x_A_359 - HH => SUBCLASS : 1.6.1
1d4x_A_274 - HH => SUBCLASS : 2.1.17
1d4x_A_182 - HH => SUBCLASS : 6.14.1
1d4x_A_290 - HE => SUBCLASS : 1.3.14
1d4x_A_113 - HE => SUBCLASS : 3.1.1
1d4x_G_71 - HE => SUBCLASS : 3.18.3
1d4x_A_79 - HE => SUBCLASS : 6.9.1
1d4x_A_338 - HE => SUBCLASS : 8.6.1
1d4x_G_16 - HA => SUBCLASS : 2.1.1
1d4x_A_71 - HA => SUBCLASS : 2.1.1
1d4x_A_150 - HA => SUBCLASS : 2.2.1
1d4x_A_8 - HA => SUBCLASS : 2.2.3
1d4x_A_238 - HA => SUBCLASS : 3.1.1
1d4x_G_43 - HA => SUBCLASS : 3.1.2
1d4x_G_43 - HA => SUBCLASS : 5.1.2
1d4x_G_43 - HA => SUBCLASS : 5.1.4
1d4x_A_16 - HA => SUBCLASS : 7.14.1

Loops not clustered in ArchDB

1d4x_A_29 - AR
1d4x_A_297 - EH
1d4x_A_357 - EH
1d4x_A_329 - EH
1d4x_A_131 - EH
1d4x_A_103 - EH
1d4x_A_75 - EH
1d4x_A_53 - EH
1d4x_A_160 - HA
1d4x_A_35 - HA
1d4x_A_223 - HE
1d4x_A_309 - HE
1d4x_A_137 - HE
1d4x_A_56 - HE
1d4x_G_6 - HE
1d4x_G_104 - HE
1d4x_A_203 - HH
1d4x_A_253 - HH

1c0f A - percentage of sequence identity: 91
1c0f S - percentage of sequence identity: 99
1c0g S - percentage of sequence identity: 99
1dej S - percentage of sequence identity: 99
1eqy S - percentage of sequence identity: 99
1esv S - percentage of sequence identity: 99
1mdu A - percentage of sequence identity: 100
1mdu D - percentage of sequence identity: 100
1nlv G - percentage of sequence identity: 100
1nm1 A - percentage of sequence identity: 94
1nm1 G - percentage of sequence identity: 100
1nmd G - percentage of sequence identity: 100
1p8z G - percentage of sequence identity: 100
1qz5 A - percentage of sequence identity: 93
1rgi G - percentage of sequence identity: 98
1t44 G - percentage of sequence identity: 100
1yag A - percentage of sequence identity: 88
1yag G - percentage of sequence identity: 100
1yvn G - percentage of sequence identity: 100
2vik - - percentage of sequence identity: 61
2vil - - percentage of sequence identity: 61