PDB: 1dar Compound: elongation factor g Classification: TRANSLATIONAL GTPASE Entry date in PDB: 1996-07-11 Resolution [Å]: 2.40 R-Factor: 0.220

CHAIN: - SWISS-PROT/TREMBL: P13551    KEYWORD: 3D-structure    Elongation factor    GTP-binding    Protein biosynthesis    SCOP: b.43.3.1 All beta proteins    Reductase/isomerase/elongation factor common domain    Translation proteins    Elongation factors    Elongation factor G (EF-G), domain II    Thermus thermophilus SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Elongation factor G (EF-G), N-terminal (G) domain    Thermus thermophilus SCOP: d.14.1.1 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    Translational machinery components    Elongation factor G (EF-G), domain IV    Thermus thermophilus SCOP: d.58.11.1 Alpha and beta proteins (a+b)    Ferredoxin-like    EF-G C-terminal domain-like    EF-G/eEF-2 domains III and V    Elongation factor G (EF-G)    Thermus thermophilus GO:  GTP binding    translation elongation factor activity    protein biosynthesis    translational elongation

Image Source: PDB

Loops in ArchDB40 clusters

1dar_*_69 - HA => SUBCLASS : 2.1.1
1dar_*_631 - HA => SUBCLASS : 2.3.2
1dar_*_631 - HA => SUBCLASS : 2.3.3
1dar_*_289 - HA => SUBCLASS : 3.1.1
1dar_*_354 - HA => SUBCLASS : 3.23.1
1dar_*_340 - HA => SUBCLASS : 4.1.1
1dar_*_176 - HA => SUBCLASS : 4.1.1
1dar_*_184 - HA => SUBCLASS : 6.11.2
1dar_*_668 - EH => SUBCLASS : 1.1.5
1dar_*_668 - EH => SUBCLASS : 1.1.11
1dar_*_103 - EH => SUBCLASS : 6.11.1
1dar_*_161 - AR => SUBCLASS : 1.1.1
1dar_*_484 - AR => SUBCLASS : 2.1.1
1dar_*_484 - AR => SUBCLASS : 2.1.3
1dar_*_348 - AR => SUBCLASS : 2.1.3
1dar_*_334 - AR => SUBCLASS : 3.3.1
1dar_*_368 - AR => SUBCLASS : 3.3.1
1dar_*_206 - HH => SUBCLASS : 1.2.16
1dar_*_225 - HH => SUBCLASS : 5.3.5

Loops in ArchDB95 clusters

1dar_*_668 - EH => SUBCLASS : 1.1.3
1dar_*_12 - EH => SUBCLASS : 5.5.1
1dar_*_103 - EH => SUBCLASS : 6.21.1
1dar_*_334 - AR => SUBCLASS : 1.1.4
1dar_*_161 - AR => SUBCLASS : 1.2.3
1dar_*_484 - AR => SUBCLASS : 2.1.1
1dar_*_348 - AR => SUBCLASS : 2.1.1
1dar_*_484 - AR => SUBCLASS : 3.1.1
1dar_*_368 - AR => SUBCLASS : 3.3.1
1dar_*_334 - AR => SUBCLASS : 3.3.1
1dar_*_368 - AR => SUBCLASS : 3.3.2
1dar_*_206 - HH => SUBCLASS : 1.2.41
1dar_*_225 - HH => SUBCLASS : 5.4.1
1dar_*_69 - HA => SUBCLASS : 2.1.1
1dar_*_289 - HA => SUBCLASS : 3.1.1
1dar_*_354 - HA => SUBCLASS : 3.28.1
1dar_*_340 - HA => SUBCLASS : 4.1.1
1dar_*_176 - HA => SUBCLASS : 4.1.1
1dar_*_184 - HA => SUBCLASS : 6.12.1

Loops not clustered in ArchDB

1dar_*_470 - AR
1dar_*_506 - AR
1dar_*_388 - AR
1dar_*_374 - AR
1dar_*_363 - AR
1dar_*_323 - AR
1dar_*_298 - AR
1dar_*_132 - EH
1dar_*_77 - EH
1dar_*_256 - EH
1dar_*_523 - EH
1dar_*_563 - EH
1dar_*_600 - EH
1dar_*_640 - EH
1dar_*_196 - EH
1dar_*_165 - HA
1dar_*_491 - HA
1dar_*_449 - HA
1dar_*_439 - HA
1dar_*_310 - HA
1dar_*_619 - HE
1dar_*_579 - HE
1dar_*_539 - HE
1dar_*_269 - HE
1dar_*_239 - HE
1dar_*_146 - HE
1dar_*_116 - HE
1dar_*_91 - HE
1dar_*_25 - HE
1dar_*_655 - HE

1efg A - percentage of sequence identity: 99
1elo - - percentage of sequence identity: 100
1fnm A - percentage of sequence identity: 99
1jqm B - percentage of sequence identity: 99
1jqs B - percentage of sequence identity: 100
1jqs C - percentage of sequence identity: 100
1ktv A - percentage of sequence identity: 100
1ktv B - percentage of sequence identity: 100
1pn6 A - percentage of sequence identity: 99
1zn0 B - percentage of sequence identity: 95
2bcw C - percentage of sequence identity: 100
2bm0 A - percentage of sequence identity: 99
2bm1 A - percentage of sequence identity: 99
2bv3 A - percentage of sequence identity: 99
2efg A - percentage of sequence identity: 99