PDB: 1dd3 Compound: 50s ribosomal protein l7L12 Classification: RIBOSOME Entry date in PDB: 2000-11-08 Resolution [Å]: 2.00 R-Factor: 0.226

CHAIN: A SWISS-PROT/TREMBL: P29396    KEYWORD: 3D-structure    Complete proteome    Ribosomal protein    SCOP: a.108.1.1 All alpha proteins    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Thermotoga maritima SCOP: d.45.1.1 Alpha and beta proteins (a+b)    ClpS-like    ClpS-like    Ribosomal protein L7/12, C-terminal domain    Ribosomal protein L7/12, C-terminal domain    Thermotoga maritima GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis    CHAIN: B SWISS-PROT/TREMBL: P29396    KEYWORD: 3D-structure    Complete proteome    Ribosomal protein    SCOP: a.108.1.1 All alpha proteins    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Thermotoga maritima SCOP: d.45.1.1 Alpha and beta proteins (a+b)    ClpS-like    ClpS-like    Ribosomal protein L7/12, C-terminal domain    Ribosomal protein L7/12, C-terminal domain    Thermotoga maritima GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis    CHAIN: C SWISS-PROT/TREMBL: P29396    KEYWORD: 3D-structure    Complete proteome    Ribosomal protein    SCOP: a.108.1.1 All alpha proteins    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Thermotoga maritima GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis    CHAIN: D SWISS-PROT/TREMBL: P29396    KEYWORD: 3D-structure    Complete proteome    Ribosomal protein    SCOP: a.108.1.1 All alpha proteins    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Ribosomal protein L7/12, oligomerisation (N-terminal) domain    Thermotoga maritima GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1dd3_A_108 - HE => SUBCLASS : 1.1.1
1dd3_A_3 - HH => SUBCLASS : 2.1.2

Loops in ArchDB95 clusters

1dd3_A_3 - HH => SUBCLASS : 2.1.1
1dd3_A_108 - HE => SUBCLASS : 1.1.1

Loops not clustered in ArchDB

1dd3_A_59 - EH
1dd3_A_101 - EH
1dd3_A_31 - HE
1dd3_A_85 - HE
1dd3_A_15 - HH
1dd3_A_70 - HH
1dd3_C_2 - HH

1ctf - - percentage of sequence identity: 68
1dd3 A - percentage of sequence identity: 100
1dd3 B - percentage of sequence identity: 100
1dd3 C - percentage of sequence identity: 100
1dd3 D - percentage of sequence identity: 100
1dd4 A - percentage of sequence identity: 100
1dd4 B - percentage of sequence identity: 100
1dd4 C - percentage of sequence identity: 100
1giy I - percentage of sequence identity: 100
1giy J - percentage of sequence identity: 100
1rqs A - percentage of sequence identity: 69
1yl3 I - percentage of sequence identity: 100
1yl3 J - percentage of sequence identity: 100
2bcw B - percentage of sequence identity: 67