PDB: 1dfo Compound: serine hydroxymethyltransferase Classification: TRANSFERASE Entry date in PDB: 1999-12-10 Resolution [Å]: 2.40 R-Factor: 0.174

CHAIN: A SWISS-PROT/TREMBL: P00477    KEYWORD: 3D-structure    Complete proteome    One-carbon metabolism    Pyridoxal phosphate    Transferase    EC: 2.1.2.1 SCOP: c.67.1.4 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    GABA-aminotransferase-like    Serine hydroxymethyltransferase    Escherichia coli GO:   CHAIN: B SWISS-PROT/TREMBL: P00477    KEYWORD: 3D-structure    Complete proteome    One-carbon metabolism    Pyridoxal phosphate    Transferase    EC: 2.1.2.1 SCOP: c.67.1.4 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    GABA-aminotransferase-like    Serine hydroxymethyltransferase    Escherichia coli GO:   CHAIN: C SWISS-PROT/TREMBL: P00477    KEYWORD: 3D-structure    Complete proteome    One-carbon metabolism    Pyridoxal phosphate    Transferase    EC: 2.1.2.1 SCOP: c.67.1.4 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    GABA-aminotransferase-like    Serine hydroxymethyltransferase    Escherichia coli GO:   CHAIN: D SWISS-PROT/TREMBL: P00477    KEYWORD: 3D-structure    Complete proteome    One-carbon metabolism    Pyridoxal phosphate    Transferase    EC: 2.1.2.1 SCOP: c.67.1.4 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    GABA-aminotransferase-like    Serine hydroxymethyltransferase    Escherichia coli GO:

Image Source: PDB

Loops in ArchDB95 clusters

1dfo_A_237 - EH => SUBCLASS : 3.6.1
1dfo_A_237 - EH => SUBCLASS : 3.6.3
1dfo_A_237 - EH => SUBCLASS : 3.14.1
1dfo_A_266 - HH => SUBCLASS : 1.1.4
1dfo_A_376 - HH => SUBCLASS : 1.2.7
1dfo_A_367 - HH => SUBCLASS : 3.2.1
1dfo_A_13 - HE => SUBCLASS : 0.1.1
1dfo_A_135 - HE => SUBCLASS : 0.1.4
1dfo_A_135 - HE => SUBCLASS : 0.1.7
1dfo_A_282 - HE => SUBCLASS : 1.1.1
1dfo_A_330 - HE => SUBCLASS : 1.2.1
1dfo_A_183 - HE => SUBCLASS : 1.2.2
1dfo_A_183 - HE => SUBCLASS : 1.2.3
1dfo_A_155 - HE => SUBCLASS : 3.1.1
1dfo_A_69 - HE => SUBCLASS : 3.9.1
1dfo_A_98 - HE => SUBCLASS : 5.4.1
1dfo_A_58 - HA => SUBCLASS : 2.4.4

Loops in ArchDB-EC clusters

1dfo_A_367 - HH => SUBCLASS : 3.3.1

Loops not clustered in ArchDB

1dfo_A_342 - AR
1dfo_A_342 - AR
1dfo_A_361 - EH
1dfo_A_318 - EH
1dfo_A_196 - EH
1dfo_A_169 - EH
1dfo_A_141 - EH
1dfo_A_115 - EH
1dfo_A_90 - EH
1dfo_A_62 - EH
1dfo_A_30 - EH
1dfo_A_308 - HA
1dfo_A_222 - HA
1dfo_A_58 - HA
1dfo_A_345 - HA
1dfo_A_308 - HA
1dfo_A_222 - HA
1dfo_A_345 - HA
1dfo_A_205 - HE
1dfo_A_41 - HE
1dfo_A_246 - HH
1dfo_A_8 - HH

1dfo A - percentage of sequence identity: 100
1dfo B - percentage of sequence identity: 100
1dfo C - percentage of sequence identity: 100
1dfo D - percentage of sequence identity: 100
1eqb A - percentage of sequence identity: 99
1eqb B - percentage of sequence identity: 99
1eqb C - percentage of sequence identity: 99
1eqb D - percentage of sequence identity: 99
1kkj A - percentage of sequence identity: 61
1kkp A - percentage of sequence identity: 61
1kl1 A - percentage of sequence identity: 61
1kl2 A - percentage of sequence identity: 61
1kl2 B - percentage of sequence identity: 61
1yjs A - percentage of sequence identity: 61
1yjy A - percentage of sequence identity: 61
1yjz A - percentage of sequence identity: 61