PDB: 1dgw Compound: canavalin Classification: PLANT PROTEIN Entry date in PDB: 1999-12-20 Resolution [Å]: 1.70 R-Factor: 0.189

CHAIN: A SWISS-PROT/TREMBL: P50477    KEYWORD: 3D-structure    Seed storage protein    Signal    SCOP: b.82.1.2 All beta proteins    Double-stranded beta-helix    RmlC-like cupins    Germin/Seed storage 7S protein    Seed storage 7S protein    Jack bean (Canavalia ensiformis), canavalin/vinculin GO:  nutrient reservoir activity    CHAIN: X SWISS-PROT/TREMBL: P50477    KEYWORD: 3D-structure    Seed storage protein    Signal    SCOP: b.82.1.2 All beta proteins    Double-stranded beta-helix    RmlC-like cupins    Germin/Seed storage 7S protein    Seed storage 7S protein    Jack bean (Canavalia ensiformis), canavalin/vinculin GO:  nutrient reservoir activity    CHAIN: Y SWISS-PROT/TREMBL: P50477    KEYWORD: 3D-structure    Seed storage protein    Signal    SCOP: b.82.1.2 All beta proteins    Double-stranded beta-helix    RmlC-like cupins    Germin/Seed storage 7S protein    Seed storage 7S protein    Jack bean (Canavalia ensiformis), canavalin/vinculin GO:  nutrient reservoir activity

Image Source: PDB

Loops in ArchDB40 clusters

1dgw_A_116 - HA => SUBCLASS : 2.2.2
1dgw_X_258 - HA => SUBCLASS : 2.2.4
1dgw_A_56 - HA => SUBCLASS : 2.2.24
1dgw_A_107 - AR => SUBCLASS : 1.3.1
1dgw_A_126 - AR => SUBCLASS : 3.3.4
1dgw_A_126 - AR => SUBCLASS : 3.3.11
1dgw_A_86 - AR => SUBCLASS : 3.5.2
1dgw_A_137 - AR => SUBCLASS : 4.1.2
1dgw_A_146 - AR => SUBCLASS : 6.15.1
1dgw_A_192 - HH => SUBCLASS : 3.1.2

Loops in ArchDB95 clusters

1dgw_A_86 - AR => SUBCLASS : 1.1.2
1dgw_A_107 - AR => SUBCLASS : 1.3.5
1dgw_A_126 - AR => SUBCLASS : 2.5.1
1dgw_A_126 - AR => SUBCLASS : 3.3.7
1dgw_A_137 - AR => SUBCLASS : 3.6.2
1dgw_A_86 - AR => SUBCLASS : 3.6.3
1dgw_A_146 - AR => SUBCLASS : 4.34.1
1dgw_A_192 - HH => SUBCLASS : 3.4.1
1dgw_A_116 - HA => SUBCLASS : 2.2.2
1dgw_A_56 - HA => SUBCLASS : 2.2.10

Loops not clustered in ArchDB

1dgw_A_97 - AR
1dgw_A_157 - AR
1dgw_A_174 - EH
1dgw_X_263 - EH
1dgw_A_65 - HA
1dgw_A_203 - HE
1dgw_X_274 - HE
1dgw_Y_392 - HH

1cau A - percentage of sequence identity: 100
1cav A - percentage of sequence identity: 100
1caw A - percentage of sequence identity: 100
1cax A - percentage of sequence identity: 100
1cax C - percentage of sequence identity: 100
1cax E - percentage of sequence identity: 100
1dgr A - percentage of sequence identity: 100
1dgr B - percentage of sequence identity: 100
1dgr C - percentage of sequence identity: 100
2cau A - percentage of sequence identity: 100
2cav A - percentage of sequence identity: 100