PDB: 1ds6 Compound: ras-related c3 botulinum toxin substrate 2 Classification: SIGNALING PROTEIN Entry date in PDB: 2000-07-12 Resolution [Å]: 2.35 R-Factor: 0.234

CHAIN: A SWISS-PROT/TREMBL: P15153    KEYWORD: 3D-structure    Disease mutation    GTP-binding    Lipoprotein    Prenylation    SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Rac    Human (Homo sapiens) GO:  GTP binding    small GTPase mediated signal transduction    CHAIN: B SWISS-PROT/TREMBL: P52566    KEYWORD: 3D-structure    GTPase activation    3D-structure    GTPase activation    SCOP: b.1.18.8 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    RhoGDI-like    Rho GDP-dissociation inhibitor 1, RhoGDI    Human (Homo sapiens) GO:  cytoplasm    Rho GDP-dissociation inhibitor activity

Image Source: PDB

Loops in ArchDB95 clusters

1ds6_B_84 - EH => SUBCLASS : 4.2.5
1ds6_B_84 - EH => SUBCLASS : 4.2.13
1ds6_A_110 - EH => SUBCLASS : 7.26.1
1ds6_B_98 - AR => SUBCLASS : 1.1.2
1ds6_B_98 - AR => SUBCLASS : 1.1.4
1ds6_B_98 - AR => SUBCLASS : 3.3.1
1ds6_A_123 - HH => SUBCLASS : 6.7.1
1ds6_B_91 - HE => SUBCLASS : 0.1.1
1ds6_A_139 - HE => SUBCLASS : 3.1.1
1ds6_A_97 - HE => SUBCLASS : 5.6.1
1ds6_A_97 - HE => SUBCLASS : 5.6.4
1ds6_A_40 - HA => SUBCLASS : 2.1.1
1ds6_B_120 - HA => SUBCLASS : 2.5.3

Loops not clustered in ArchDB

1ds6_B_106 - AR
1ds6_B_134 - AR
1ds6_B_153 - AR
1ds6_B_160 - AR
1ds6_A_50 - AR
1ds6_A_2 - EH
1ds6_A_153 - EH
1ds6_A_77 - EH
1ds6_B_69 - HA
1ds6_B_170 - HA
1ds6_B_43 - HE
1ds6_A_16 - HE
1ds6_B_32 - HH
1ds6_A_87 - HH

1ajw - - percentage of sequence identity: 75
1cc0 E - percentage of sequence identity: 74
1cc0 F - percentage of sequence identity: 74
1doa B - percentage of sequence identity: 74
1fst A - percentage of sequence identity: 73
1fst B - percentage of sequence identity: 73
1ft0 A - percentage of sequence identity: 77
1ft0 B - percentage of sequence identity: 77
1ft3 A - percentage of sequence identity: 77
1ft3 B - percentage of sequence identity: 77
1gdf - - percentage of sequence identity: 75
1hh4 D - percentage of sequence identity: 74
1hh4 E - percentage of sequence identity: 74
1kmt B - percentage of sequence identity: 76
1qvy A - percentage of sequence identity: 76
1qvy B - percentage of sequence identity: 76
1qvy C - percentage of sequence identity: 76
1qvy D - percentage of sequence identity: 76
1rho A - percentage of sequence identity: 75
1rho B - percentage of sequence identity: 75
1rho C - percentage of sequence identity: 75
1ryh A - percentage of sequence identity: 86
2bxw A - percentage of sequence identity: 76
2bxw B - percentage of sequence identity: 76
2ngr A - percentage of sequence identity: 68