PDB: 1e4y Compound: adenylate kinase Classification: TRANSFERASE(PHOSPHOTRANSFERASE) Entry date in PDB: 2000-08-04 Resolution [Å]: 1.85 R-Factor: 0.178

CHAIN: A SWISS-PROT/TREMBL: P05082    KEYWORD: 3D-structure    ATP-binding    Complete proteome    Kinase    Transferase    EC: 2.7.4.3 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Adenylate kinase    Escherichia coli SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Adenylate kinase    Escherichia coli SCOP: g.41.2.1 Small proteins    Rubredoxin-like    Microbial and mitochondrial ADK, insert "zinc finger" domain    Microbial and mitochondrial ADK, insert "zinc finger" domain    Microbial and mitochondrial ADK, insert "zinc finger" domain    Escherichia coli GO:   CHAIN: B SWISS-PROT/TREMBL: P05082    KEYWORD: 3D-structure    ATP-binding    Complete proteome    Kinase    Transferase    EC: 2.7.4.3 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Adenylate kinase    Escherichia coli SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Adenylate kinase    Escherichia coli SCOP: g.41.2.1 Small proteins    Rubredoxin-like    Microbial and mitochondrial ADK, insert "zinc finger" domain    Microbial and mitochondrial ADK, insert "zinc finger" domain    Microbial and mitochondrial ADK, insert "zinc finger" domain    Escherichia coli GO:

Image Source: PDB

Loops in ArchDB95 clusters

1e4y_A_105 - EH => SUBCLASS : 1.1.3
1e4y_A_105 - EH => SUBCLASS : 1.1.22
1e4y_A_193 - EH => SUBCLASS : 4.2.3
1e4y_A_2 - EH => SUBCLASS : 5.5.2
1e4y_A_131 - AR => SUBCLASS : 18.2.1
1e4y_A_31 - HH => SUBCLASS : 2.2.4
1e4y_A_44 - HH => SUBCLASS : 5.4.1
1e4y_A_115 - HE => SUBCLASS : 0.1.2
1e4y_A_115 - HE => SUBCLASS : 0.1.13
1e4y_A_13 - HE => SUBCLASS : 1.2.3
1e4y_A_177 - HE => SUBCLASS : 2.9.1
1e4y_A_13 - HE => SUBCLASS : 3.2.1
1e4y_A_90 - HE => SUBCLASS : 5.3.2
1e4y_A_61 - HE => SUBCLASS : 7.9.1
1e4y_A_123 - HA => SUBCLASS : 4.1.1

Loops in ArchDB-KI clusters

1e4y_A_105 - EH => SUBCLASS : 1.1.2
1e4y_A_193 - EH => SUBCLASS : 4.3.1
1e4y_A_2 - EH => SUBCLASS : 6.2.1
1e4y_A_123 - HA => SUBCLASS : 3.1.1
1e4y_A_123 - HA => SUBCLASS : 4.2.1
1e4y_A_13 - HE => SUBCLASS : 3.5.2
1e4y_A_44 - HH => SUBCLASS : 4.3.1

Loops not clustered in ArchDB

1e4y_A_28 - EH
1e4y_A_81 - EH
1e4y_A_154 - EH
1e4y_A_161 - HH

Loops not clustered in ArchDB-KI

1e4y_A_131 - AR
1e4y_A_28 - EH
1e4y_A_154 - EH
1e4y_A_81 - EH
1e4y_A_90 - HE
1e4y_A_177 - HE
1e4y_A_61 - HE
1e4y_A_115 - HE
1e4y_A_161 - HH
1e4y_A_31 - HH

1ake A - percentage of sequence identity: 99
1ake B - percentage of sequence identity: 99
1ank A - percentage of sequence identity: 99
1ank B - percentage of sequence identity: 99
1e4v A - percentage of sequence identity: 99
1e4v B - percentage of sequence identity: 99
1e4y A - percentage of sequence identity: 100
1e4y B - percentage of sequence identity: 100
2eck A - percentage of sequence identity: 99
2eck B - percentage of sequence identity: 99
4ake A - percentage of sequence identity: 99
4ake B - percentage of sequence identity: 99