PDB: 1f1z Compound: tnsa endonuclease Classification: DNA BINDING PROTEIN Entry date in PDB: 2000-06-28 Resolution [Å]: 2.40 R-Factor: 0.202

CHAIN: A SWISS-PROT/TREMBL: P13988    KEYWORD: 3D-structure    DNA recombination    DNA-binding    Plasmid    Transposable element    Transposition    SCOP: a.4.5.27 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    TnsA endonuclease, C-terminal domain    TnsA endonuclease, C-terminal domain    Escherichia coli SCOP: c.52.1.16 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    TnsA endonuclease, N-terminal domain    TnsA endonuclease, N-terminal domain    Escherichia coli GO:   CHAIN: B SWISS-PROT/TREMBL: P13988    KEYWORD: 3D-structure    DNA recombination    DNA-binding    Plasmid    Transposable element    Transposition    SCOP: a.4.5.27 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    TnsA endonuclease, C-terminal domain    TnsA endonuclease, C-terminal domain    Escherichia coli SCOP: c.52.1.16 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    TnsA endonuclease, N-terminal domain    TnsA endonuclease, N-terminal domain    Escherichia coli GO:

Image Source: PDB

Loops in ArchDB40 clusters

1f1z_A_140 - HE => SUBCLASS : 1.1.2
1f1z_A_227 - HE => SUBCLASS : 2.4.1
1f1z_A_61 - HE => SUBCLASS : 3.3.2
1f1z_A_103 - HA => SUBCLASS : 2.1.1
1f1z_A_45 - HA => SUBCLASS : 4.1.1
1f1z_A_45 - HA => SUBCLASS : 6.1.1
1f1z_A_55 - EH => SUBCLASS : 2.1.1
1f1z_A_76 - EH => SUBCLASS : 3.5.5
1f1z_A_195 - HH => SUBCLASS : 2.3.3
1f1z_A_210 - HH => SUBCLASS : 5.22.1

Loops in ArchDB95 clusters

1f1z_A_55 - EH => SUBCLASS : 2.1.1
1f1z_A_195 - HH => SUBCLASS : 2.3.4
1f1z_A_210 - HH => SUBCLASS : 5.30.1
1f1z_A_140 - HE => SUBCLASS : 1.2.3
1f1z_A_227 - HE => SUBCLASS : 2.4.1
1f1z_A_61 - HE => SUBCLASS : 3.6.3
1f1z_A_87 - HE => SUBCLASS : 5.28.1
1f1z_A_103 - HA => SUBCLASS : 2.1.1
1f1z_A_45 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1f1z_A_107 - AR
1f1z_A_126 - EH
1f1z_A_160 - EH
1f1z_A_112 - HA
1f1z_A_241 - HA
1f1z_A_13 - HE
1f1z_A_170 - HH
1f1z_A_189 - HH

1f1z A - percentage of sequence identity: 100
1f1z B - percentage of sequence identity: 100
1t0f A - percentage of sequence identity: 100
1t0f B - percentage of sequence identity: 100