PDB: 1f5n Compound: interferon-induced guanylate-binding protein 1 Classification: SIGNALING PROTEIN Entry date in PDB: 2000-09-27 Resolution [Å]: 1.70 R-Factor: 0.226

CHAIN: A SWISS-PROT/TREMBL: P32455    KEYWORD: 3D-structure    GTP-binding    Interferon induction    Lipoprotein    Multigene family    Polymorphism    Prenylation    SCOP: a.114.1.1 All alpha proteins    Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain    Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain    Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain    Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain    Human (Homo sapiens) SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain    Human (Homo sapiens) GO:  GTP binding    GTPase activity    immune response

Image Source: PDB

Loops in ArchDB40 clusters

1f5n_A_112 - HE => SUBCLASS : 2.3.1
1f5n_A_11 - HA => SUBCLASS : 2.1.1
1f5n_A_281 - HA => SUBCLASS : 2.1.1
1f5n_A_11 - HA => SUBCLASS : 2.4.2
1f5n_A_78 - HA => SUBCLASS : 6.5.1
1f5n_A_20 - EH => SUBCLASS : 1.1.3
1f5n_A_286 - EH => SUBCLASS : 1.1.4
1f5n_A_20 - EH => SUBCLASS : 1.1.15
1f5n_A_38 - EH => SUBCLASS : 5.7.2

Loops in ArchDB95 clusters

1f5n_A_20 - EH => SUBCLASS : 1.1.7
1f5n_A_286 - EH => SUBCLASS : 2.2.1
1f5n_A_38 - EH => SUBCLASS : 5.5.2
1f5n_A_290 - HH => SUBCLASS : 5.1.3
1f5n_A_112 - HE => SUBCLASS : 2.2.1
1f5n_A_214 - HE => SUBCLASS : 2.3.14
1f5n_A_25 - HE => SUBCLASS : 4.3.2
1f5n_A_281 - HA => SUBCLASS : 2.1.1
1f5n_A_11 - HA => SUBCLASS : 2.1.1
1f5n_A_11 - HA => SUBCLASS : 2.1.4
1f5n_A_11 - HA => SUBCLASS : 2.5.1
1f5n_A_281 - HA => SUBCLASS : 3.2.1
1f5n_A_78 - HA => SUBCLASS : 7.1.1

Loops not clustered in ArchDB

1f5n_A_92 - EH
1f5n_A_125 - EH
1f5n_A_177 - EH
1f5n_A_233 - EH
1f5n_A_260 - HE
1f5n_A_171 - HE
1f5n_A_51 - HE
1f5n_A_469 - HH
1f5n_A_457 - HH
1f5n_A_432 - HH
1f5n_A_379 - HH
1f5n_A_350 - HH
1f5n_A_312 - HH
1f5n_A_198 - HH
1f5n_A_148 - HH
1f5n_A_143 - HH
1f5n_A_136 - HH
1f5n_A_484 - HH

1dg3 A - percentage of sequence identity: 100