PDB: 1g8t Compound: nuclease sm2 isoform Classification: HYDROLASE Entry date in PDB: 2000-12-06 Resolution [Å]: 1.10 R-Factor: 0.129

CHAIN: A SWISS-PROT/TREMBL: P13717    KEYWORD: 3D-structure    Endonuclease    Hydrolase    Magnesium    Nuclease    Signal    EC: 3.1.30.2 SCOP: d.4.1.2 Alpha and beta proteins (a+b)    His-Me finger endonucleases    His-Me finger endonucleases    Sm endonuclease    Sm endonuclease    Serratia marcescens GO:  endonuclease activity    nucleic acid binding    CHAIN: B SWISS-PROT/TREMBL: P13717    KEYWORD: 3D-structure    Endonuclease    Hydrolase    Magnesium    Nuclease    Signal    EC: 3.1.30.2 SCOP: d.4.1.2 Alpha and beta proteins (a+b)    His-Me finger endonucleases    His-Me finger endonucleases    Sm endonuclease    Sm endonuclease    Serratia marcescens GO:  endonuclease activity    nucleic acid binding

Image Source: PDB

Loops in ArchDB40 clusters

1g8t_A_79 - HE => SUBCLASS : 1.1.1
1g8t_A_79 - HE => SUBCLASS : 1.1.4
1g8t_A_79 - HE => SUBCLASS : 1.1.9
1g8t_A_23 - HA => SUBCLASS : 2.2.1
1g8t_A_29 - HA => SUBCLASS : 4.1.2
1g8t_A_111 - EH => SUBCLASS : 0.1.8

Loops in ArchDB95 clusters

1g8t_A_111 - EH => SUBCLASS : 0.1.18
1g8t_A_111 - EH => SUBCLASS : 0.1.20
1g8t_A_79 - HE => SUBCLASS : 1.2.2
1g8t_A_79 - HE => SUBCLASS : 1.2.4
1g8t_A_79 - HE => SUBCLASS : 1.2.6
1g8t_A_23 - HA => SUBCLASS : 2.2.1
1g8t_A_23 - HA => SUBCLASS : 3.1.1
1g8t_A_29 - HA => SUBCLASS : 4.1.2

Loops in ArchDB-EC clusters

1g8t_A_79 - HE => SUBCLASS : 1.2.4

Loops not clustered in ArchDB

1g8t_A_39 - EH
1g8t_A_85 - EH
1g8t_A_185 - EH
1g8t_A_142 - HA
1g8t_A_29 - HA
1g8t_A_23 - HA
1g8t_A_169 - HA
1g8t_A_142 - HA
1g8t_A_169 - HA
1g8t_A_122 - HE
1g8t_A_93 - HE
1g8t_A_116 - HH
1g8t_A_207 - HH

1g8t A - percentage of sequence identity: 100
1g8t B - percentage of sequence identity: 100
1qae A - percentage of sequence identity: 100
1qae B - percentage of sequence identity: 100
1ql0 A - percentage of sequence identity: 99
1ql0 B - percentage of sequence identity: 99
1smn A - percentage of sequence identity: 100
1smn B - percentage of sequence identity: 100