PDB: 1gpq Compound: inhibitor of vertebrate lysozyme Classification: LYSOZYME/INHIBITOR COMPLEX Entry date in PDB: 2003-03-11 Resolution [Å]: 1.60 R-Factor: 0.181

CHAIN: A SWISS-PROT/TREMBL: P45502    KEYWORD: 3D-structure    Complete proteome    Periplasmic    Signal    SCOP: d.233.1.1 Alpha and beta proteins (a+b)    Inhibitor of vertebrate lysozyme, Ivy    Inhibitor of vertebrate lysozyme, Ivy    Inhibitor of vertebrate lysozyme, Ivy    Inhibitor of vertebrate lysozyme, Ivy    Escherichia coli GO:   CHAIN: B SWISS-PROT/TREMBL: P45502    KEYWORD: 3D-structure    Complete proteome    Periplasmic    Signal    SCOP: d.233.1.1 Alpha and beta proteins (a+b)    Inhibitor of vertebrate lysozyme, Ivy    Inhibitor of vertebrate lysozyme, Ivy    Inhibitor of vertebrate lysozyme, Ivy    Inhibitor of vertebrate lysozyme, Ivy    Escherichia coli GO:   CHAIN: C SWISS-PROT/TREMBL: P00698    KEYWORD: 3D-structure    Allergen    Bacteriolytic enzyme    Glycosidase    Hydrolase    Signal    EC: 3.2.1.17 SCOP: d.2.1.2 Alpha and beta proteins (a+b)    Lysozyme-like    Lysozyme-like    C-type lysozyme    Lysozyme    Chicken (Gallus gallus) GO:  extracellular region    lysozyme activity    cell wall catabolism    CHAIN: D SWISS-PROT/TREMBL: P00698    KEYWORD: 3D-structure    Allergen    Bacteriolytic enzyme    Glycosidase    Hydrolase    Signal    EC: 3.2.1.17 SCOP: d.2.1.2 Alpha and beta proteins (a+b)    Lysozyme-like    Lysozyme-like    C-type lysozyme    Lysozyme    Chicken (Gallus gallus) GO:  extracellular region    lysozyme activity    cell wall catabolism

Image Source: PDB

Loops in ArchDB40 clusters

1gpq_A_42 - HA => SUBCLASS : 2.3.6
1gpq_A_78 - HA => SUBCLASS : 4.1.1
1gpq_A_65 - HA => SUBCLASS : 4.1.2
1gpq_A_65 - HA => SUBCLASS : 6.1.1
1gpq_A_6 - HH => SUBCLASS : 1.1.12
1gpq_A_106 - HH => SUBCLASS : 1.3.6

Loops in ArchDB95 clusters

1gpq_A_6 - HH => SUBCLASS : 1.1.13
1gpq_A_42 - HA => SUBCLASS : 2.3.3
1gpq_A_65 - HA => SUBCLASS : 4.1.1
1gpq_A_78 - HA => SUBCLASS : 4.1.1
1gpq_A_65 - HA => SUBCLASS : 4.1.2

Loops not clustered in ArchDB

1gpq_A_37 - AR
1gpq_A_91 - EH
1gpq_A_49 - HA
1gpq_A_31 - HE
1gpq_A_16 - HH

1ghl A - percentage of sequence identity: 93
1gpq A - percentage of sequence identity: 100
1gpq B - percentage of sequence identity: 100
1hhl - - percentage of sequence identity: 91
1jse - - percentage of sequence identity: 94
1jsf - - percentage of sequence identity: 60
1lmq - - percentage of sequence identity: 61
1lsg - - percentage of sequence identity: 100
1xs0 A - percentage of sequence identity: 100
1xs0 B - percentage of sequence identity: 100
1xs0 C - percentage of sequence identity: 100
3lzt - - percentage of sequence identity: 100